Klebsiella huaxiensis: DA718_05775
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Entry
DA718_05775 CDS
T05915
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
klw
Klebsiella huaxiensis
Brite
KEGG Orthology (KO) [BR:
klw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
klw03009
]
DA718_05775 (rlmD)
Enzymes [BR:
klw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DA718_05775 (rlmD)
Ribosome biogenesis [BR:
klw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DA718_05775 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
RrnaAD
PCMT
TRM5-TYW2_MTfase
MTS
Methyltransf_11
Cons_hypoth95
Methyltransf_23
Methyltransf_15
FtsJ
Methyltrans_SAM
Methyltr_RsmB-F
Methyltransf_4
Methyltransf_12
PrmA
TPMT
CMAS
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
QBG06733
LinkDB
All DBs
Position
1201979..1203319
Genome browser
AA seq
446 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHQGKALFVSGLLPQEQAEVVLVEDKKQ
YARAQVKRRLSDSPQRETPRCPHFGVCGGCQQQHASIDLQQQSKRAALARLMKRDVDDII
AASPWGYRRRARLSLNYQPKTQQLQVGFRKANSNEIVDVVQCPVLVPTLGALLPAVRECL
SELKSVRQLGHVELVLADNGPLMVLRHTATLSAADKEKLERFSQSHGLSLYLAPQSEILE
HISGESPWYTSDGLRLVFSPRDFIQVNDGVNQLMVRTALEWLDLQPEDRVLDLFCGMGNF
TLPLAKRAAQVVGVEGVPALVEKGRENATFNGLHNVTFFHENLEEDVTRQAWAKHGFDKI
LLDPARAGAAGVMLHIIKLAPRRVVYVSCNPATLARDSDVLLQAGYTIQRLAMLDMFPHT
GHLESMVLFEHKHTQNHSNRIEAATE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacggcgtgtgacgacgcgccagatcataaccgttaca
gtcaatgaccttgacccttttggtcaaggcgttgcgcgtcatcagggtaaagcgctgttt
gtcagcggcttattgccgcaagagcaggcggaagttgtcctggtcgaagataaaaaacag
tatgcccgcgcgcaggttaaacgccgtcttagcgacagcccgcaacgagaaacaccgcgc
tgcccgcattttggcgtctgcggaggatgccagcaacagcacgccagcatcgacctgcag
cagcagagtaaacgcgctgcacttgccaggctaatgaaacgcgatgtcgatgacattata
gccgcttcaccttggggctaccgtcggcgggcgcggttgagcttgaattatcagccaaag
acccaacaattacaggtaggcttccggaaggctaattcaaacgaaattgttgacgtggtg
cagtgccctgttttggtgcccactcttggtgcgttattgcctgcggtgcgggagtgtctt
tccgaattgaaatcggttcgtcagcttggtcatgtcgagttggtgctggcggataacggt
ccgttgatggtattgcgccacactgccaccctttctgcggcagataaagaaaaactggaa
cgcttttcgcaatctcacggtctttccctgtatctggcaccgcaaagcgagatactggag
catattagcggggaatctccctggtacacatctgacggtctacgcttagtgttcagcccg
cgcgattttatccaggtgaacgatggcgtaaaccagcttatggtgcgcacggcgctggag
tggttggatcttcagccagaggaccgggtgctggatctgttctgcgggatggggaatttt
accctaccgttggcaaagcgtgctgcgcaggtcgtcggcgtagaaggggttcccgctctg
gtggaaaaggggcgcgagaacgcaacgttcaacggattgcacaatgtaacgttctttcat
gagaatctggaagaagacgtcactcggcaggcctgggcgaagcacggttttgataaaatt
ttgctcgacccggcgcgagccggtgcggcgggcgtaatgttacatattataaagttagcc
ccgcgccgagtggtgtatgtttcttgtaaccccgcgacgctggcgcgcgatagtgacgtt
ttattacaggcgggatataccattcaacgcctggcgatgctggatatgttcccccatacc
gggcatctggaatcaatggtgttgtttgagcacaagcatacacaaaatcattcgaatcgc
atcgaggcggcaacggagtga
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