Klebsiella huaxiensis: DA718_16240
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Entry
DA718_16240 CDS
T05915
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
klw
Klebsiella huaxiensis
Brite
KEGG Orthology (KO) [BR:
klw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
klw03032
]
DA718_16240 (topA)
03400 DNA repair and recombination proteins [BR:
klw03400
]
DA718_16240 (topA)
Enzymes [BR:
klw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DA718_16240 (topA)
DNA replication proteins [BR:
klw03032
]
Prokaryotic type
DNA Topoisomerases
DA718_16240 (topA)
DNA repair and recombination proteins [BR:
klw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DA718_16240 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QBG08624
LinkDB
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Position
complement(3370011..3372608)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSTSKKSADSTATKGAKKPK
KDERGALVNRMGVDPWHDWDAHYEILPGKEKVVAELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDEQRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEIDANTTTPGGDALSLQVTH
KADKPFRPVNRDETMAAVSLLEKAGYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYIGDNFGKKYLPENANQYTSKEN
SQEAHEAIRPSDVNVVAESLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVKAGDF
KLKARGRTLRFDGWTKVMPALRKGDEDRVLPVVKQGDSLSLVELLPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRSENRRFYAEKMGEIVTDRLEANFRELMNY
DFTAQMENSLDQVANHEAEWKKVLDSFFGDFTNQLEKAEKDPEEGGMQPNQMVLTSIDCP
TCSRQMGIRTATTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLAEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYV
ASEKDGKATGWSAFYIDGKWTEAKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ctgggtaatgactacgtggtgaaatccagcgtcggtcatatccgagatttgccgaccagt
ggctcaacttccaaaaagagcgccgactctaccgccaccaaaggggctaaaaagcctaag
aaggatgaacgtggtgctctggtcaatcgtatgggcgtggacccgtggcatgactgggat
gcgcactatgaaatacttccgggtaaagaaaaggtcgtcgcggaactcaagcagttggca
gaaaaagccgaccacatctacctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcacctgcgggaagttatcggtggtgatgagcagcgctatagtcgcgtggtgttcaat
gagatcaccaaaaatgctatccgtcaggcttttgaaaagccgggcgaactgaatattgac
cgtgttaacgcccagcaggcgcgtcgttttatggaccgcgttgtgggttacatggtgtct
ccactgttgtggaaaaagattgctcgtggtctgtccgcaggccgcgttcagtccgttgcc
gtgcgtctggttgttgagcgcgaacgcgaaattaaagcgtttgttccggaagagttctgg
gaaattgacgccaacaccaccacgcctggtggcgacgcgctgtcgttgcaggtaacgcat
aaagccgataagccattccgtccggtcaatcgtgacgaaactatggcggcggtcagcctg
ctggaaaaagcgggttatagcgtccttgagcgcgaagacaagccaaccagcagcaagcct
ggcgcaccatttattacctccactctgcagcaggcggccagcacgcgtctgggcttcggg
gtgaagaaaaccatgatgatggcgcagcgtttgtatgaagcgggctacatcacctacatg
cgtactgactccaccaacctgagtcaggatgcagtaaatatggttcgtggctatattggc
gataatttcggcaagaaatacctgccggaaaacgccaatcagtacaccagcaaagaaaat
tcgcaggaagcgcacgaagcgattcgtccttccgacgtgaacgtggtggcggaatcgctg
aaagatatggaagcggatgcgcagaaactgtatcaactgatttggcgccagtttgtcgcc
tgtcagatgacgcctgcgcaatacgactccaccacgctgaccgtaaaagcgggtgatttt
aaactcaaggcgcgcggtcgtacgctgcgctttgatggctggacgaaagtgatgccagcg
ttgcgcaaaggcgatgaagacagggttctgccggtggttaaacagggcgatagcttaagc
ctggttgaactgctcccggcacagcactttaccaaaccgcctgcgcgctttagtgaagct
tctttggttaaagagctggaaaaacgcggtatcggccgtccgtccacctatgcgtcgatc
atttcgaccattcaggatcgcggctatgtgcgcagtgaaaatcgtcgtttctacgcagag
aaaatgggtgagatcgttaccgatcgcctggaagccaacttccgcgagctgatgaactac
gattttaccgcgcagatggaaaacagccttgaccaggtggctaaccacgaagccgagtgg
aagaaggtgctcgatagcttcttcggcgacttcaccaaccagttggaaaaagcagaaaaa
gaccctgaagagggcggtatgcagccgaaccagatggtgctgaccagcatcgactgtccg
acctgtagccgtcagatgggcatccgtaccgcgacgaccggcgtcttcctgggttgctca
ggctatgcgctgtcgccgaaagagcgctgtaagaccaccatcaacctggtgccggaaaac
gaagtgctgaacgtgctggaaggtgatgacgccgaaaccaacgcgttgcgcgctaaacgt
cgctgccagaaatgcggcacggcgatggacagctacctcatcgatccgaaacgtaaactg
cacgtctgcggtaataacccgacctgcgatggctacgagatcgaagagggtgagttccgc
atcaagggctatgatggtccgatcgttgagtgtgaaaaatgtggttccgaaatgcacctg
aagatggggcgttttggtaagtacatggcttgtactaacgatgagtgtaaaaatacgcgt
aagatcctgcgtaacggggaagtggcaccgccgaaagaagatccggttccgctgccagaa
ctcccgtgcgagaaatcagacgcttactttgtgttgcgtgatggcgcagcaggtgttttc
ctggctgcgaacaccttccctaaatcgcgtgaaactcgtgcgccgttagtggaggagctg
tatcgcttccgcgatcgtctggctgagaaactgcgttatctggccgatgcgccgcagcag
gatccggaaggcaacaaaacaatggtgcgttttagccgtaagactaagcaacagtacgtt
gcttcagagaaagacggtaaagcgaccggctggtcagccttctatattgatggtaaatgg
actgaagcgaagaagtaa
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