Klebsiella huaxiensis: DA718_16860
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Entry
DA718_16860 CDS
T05915
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
klw
Klebsiella huaxiensis
Pathway
klw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
klw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DA718_16860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
klw03021
]
DA718_16860
Transcription machinery [BR:
klw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DA718_16860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_11
HTH_23
HTH_24
TnsD
HAC6_helical
HTH_31
HTH_7
GerE
HTH_20
DUF8658
HTH_36
HTH_Tnp_4
Rv2175c_wHTH
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QBG08738
LinkDB
All DBs
Position
3499966..3500487
Genome browser
AA seq
173 aa
AA seq
DB search
MSQPSATAAPLTLASLYSDHHGWLKNWLTHKLQSSFDADDVAQDTFVRIMGGEPLATIRD
PKSFLCTIAKRVMIDLFRRNALERAWLDMLSQLPEELAPSPELRQSQLELLQQIDAMLDG
LNAKTREAFLLSQLEGLTYAEIASRLSVSVSSVKKYMAKATEHCLLFRLENGL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccttccgctaccgctgcaccgttgacgcttgcctcgctgtatagcgaccat
cacggctggctgaaaaactggcttacccataagctgcaatcttcctttgacgccgatgac
gtcgcgcaggataccttcgtgcgaattatgggcggcgagccgctggcaaccattcgcgat
ccaaagtctttcctctgcacgattgccaaacgggtgatgatcgacctgtttcgtcgcaat
gcgctggagcgagcatggcttgatatgctctcacaactgccggaagaactggccccttca
cctgagttacgccaaagtcagctcgaactcctacagcaaattgacgccatgctcgacggg
cttaacgcgaaaacccgagaagcttttttactctcacagcttgaagggctgacctacgcc
gaaatcgccagccgcctgtctgtctcagtcagctcggttaagaaatatatggctaaagcc
accgagcactgcctgctgtttcgcctggagaatggcttgtga
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