Klebsiella sp. PCX: GQR96_09180
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Entry
GQR96_09180 CDS
T11064
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
klx Klebsiella sp. PCX
Pathway
klx03030
DNA replication
klx03430
Mismatch repair
klx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
klx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GQR96_09180 (holB)
03430 Mismatch repair
GQR96_09180 (holB)
03440 Homologous recombination
GQR96_09180 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
klx03032
]
GQR96_09180 (holB)
03400 DNA repair and recombination proteins [BR:
klx03400
]
GQR96_09180 (holB)
Enzymes [BR:
klx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GQR96_09180 (holB)
DNA replication proteins [BR:
klx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GQR96_09180 (holB)
DNA repair and recombination proteins [BR:
klx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GQR96_09180 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
DUF8054_M
EPF
Motif
Other DBs
NCBI-ProteinID:
UKB69362
LinkDB
All DBs
Position
1970252..1971256
Genome browser
AA seq
334 aa
AA seq
DB search
MKWYPWLRPSFEQLVGSYQAGRGHHALLLQSLSGMGGEALIYALCRFLMCRQPEGHKSCG
HCHSCQLMQAGTHPDYYPLSPEKGKSALGIDAVRDVNDKLYERARLGGAKVVWISDAALL
TDAAANALLKTLEEPPENTWFFLACEEPARLLTTLRSRCRLHHLSPPTESYALAWLEREV
NLPQEALLTALRLCASAPAAALELLKEPQWTARQQLCQALATTLASGDWLALLPILNHEQ
AAVRLHWLASLLVDAQKRQQGIALVSNPDVWPLLEQLAHSLPAARLQAIAHDVCTCREQL
LNVVGVNRELLLTERLLRWEHYLQPGTVLPVSHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccgtggctgcgcccctcgttcgaacaactggtcggtagctatcaggcc
ggacgtggccaccacgccttactgttacagtctctgagcgggatgggcggcgaggcgttg
atttatgcgctgtgccgcttcctgatgtgccgccagcctgaagggcataaaagctgcggt
cactgccacagctgccagctgatgcaggccggtacgcaccccgattactatccgctgagc
cctgagaaaggcaagagcgcgctgggtattgacgcggtgcgcgatgtcaacgacaagctc
tatgagcgcgcgcgcctcggtggggcgaaggtggtatggattagcgatgccgccttgctg
accgatgctgccgccaacgcgttgctgaaaacgctggaggagccgccggaaaatacctgg
ttcttcctcgcctgcgaggagccggcgcgtctgctgaccaccctgcgcagtcgctgccgc
ctgcaccacctgtcgccgccgacggaatcttatgccctggcctggctggagcgtgaggtg
aacctgccgcaggaggcgctgctgaccgcgttacgtctgtgcgccagcgcgccggccgcc
gcgctcgaactgcttaaagagccgcagtggacggcgcgacagcagctgtgtcaggcgctg
gcgaccacactggcgagcggtgactggctggcgctgctgccgatactcaatcatgaacag
gcggcggttcgcctgcactggctggcatcgctgctggtcgatgcgcaaaaacgacagcag
ggaattgccctggtgagtaacccggatgtctggccgctgctggagcagctggcgcacagt
ctgcccgccgcccggctgcaggcgattgcccatgacgtctgtacctgccgcgagcaattg
ctgaacgtcgtcggcgtcaaccgcgaactgctgctcaccgagcgcctgctgcgctgggaa
cattacctgcaacccgggacggttttacccgtctcccacctctga
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