Klebsiella sp. PCX: GQR96_10220
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Entry
GQR96_10220 CDS
T11064
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
klx Klebsiella sp. PCX
Brite
KEGG Orthology (KO) [BR:
klx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
klx03016
]
GQR96_10220
Enzymes [BR:
klx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GQR96_10220
Transfer RNA biogenesis [BR:
klx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GQR96_10220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
ODP
OSR1_C
Motif
Other DBs
NCBI-ProteinID:
UKB69551
LinkDB
All DBs
Position
complement(2171215..2173149)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHSEKERESAEPESLVEPFLTRFVGKVQKKDDRLAIVPDHPLLKDAIPCRAARGVEH
DFKQGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLTRRDLTALDFVTIDSASTEDMDDALYVESGADGKLLLTVAIADPTAWIAEGSK
LDNAAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLAADGTIEDNIEF
FAATIESKAKLAYDDVSDWLEGRGSWQPGSEAIAQQITLLKDVCQRRSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHEVHVDPTEVLTLEGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETIARPQDEATVQMAERRRLNRM
AERDVADWLYARFLNDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSIIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcggaaggggtcgttaagggcacggaaaagggctttggcttcctcgaagtggacgct
cagaagagctacttcattccgccgccgcagatgaaaaaagtgatgcatggcgaccgtatc
gttgcggtgatccattctgaaaaagaacgcgaaagcgccgaaccggaatcgctggttgag
cccttcctgacccgtttcgtcggtaaagtccagaagaaagacgatcgcctcgctatcgtt
cctgaccatccgctgctgaaagacgccattccctgccgcgccgcccgtggcgttgagcat
gatttcaaacagggtgactgggccgtcgcagaaatgcgccgtcatccattaaaaggcgac
cgcggattttacgcggagctgacccagttcatcaccttcagcgacgatcacttcgtcccg
tggtgggtgacgctggcgcgccataatcttgagaaagaggcaccggacggcgtcgccacc
gagatgcttgacgaagggctgactcgccgcgatttgaccgccctcgacttcgtcaccatt
gacagcgccagtaccgaagatatggacgatgcgctctatgtcgaatctggcgccgacggc
aaactgttgctgacggtggcgatcgctgacccgaccgcgtggattgccgaaggcagcaag
ctggataacgccgcaaaagtacgcgcctttaccaactatctgccgggcttcaacatcccg
atgctgccgcgcgaactgtcagacgacctgtgttccctgcgtgccaatgaagtgcgcccg
gtgttggcctgccggatgaccctggcggccgatggcaccatcgaagacaatatcgagttc
tttgccgctaccatcgaatcaaaagccaagctggcctatgacgatgtctctgactggctg
gaaggccgcggcagctggcagccgggcagcgaggcgatcgcgcagcaaattacgctgctg
aaggacgtgtgtcagcgccgcagcgaatggcgtcagacccacgcgctggtgtttaaagac
cgcccggattaccgtttcgtcctcggcgaaaaaggcgaagtgctggacatcgtcgcggag
ccgcgtcgtattgccaaccgtattgtcgaagagtcgatgatcgccgccaacatctgtgcc
gcccgcgtgctgcgcgacaagcttggcttcggcgtttataacgtccacaccggcttcgac
ccggcgaataccgaacagctggcggccctgctgaagacccacgaggtacacgttgatccg
acggaagtgctcaccctggaaggtttctgcaagctgcgccgcgaactggacgctcagccg
accggtttcctcgacagccgcatacgtcgtttccagtcgtttgctgaaatcagcaccgag
ccgggcccccactttggtcttggtcttgaggcctacgccacatggacctcgccgatccgt
aagtatggcgacatgatcaaccaccgtctgctgaaggccatcatcaaaggcgaaaccatt
gcgcgcccacaggatgaagccaccgtgcagatggcggagcgccgtcgtctcaaccgcatg
gccgaacgcgatgtcgccgactggctgtatgcccgtttcctcaacgataaagccggtacc
gacacccgctttgcggcggagatcatcgacatcagccgcggtggaatgcgcgtacgtctg
gtggacaatggcgcggtcgcctttattccggccccgttcctccacgccgtgcgcgacgaa
ctggtctgcagccaggaaaacggcaccgtgcagatcaagggagaagtggtctacaaggtg
accgatgttatcgatgtcactatcgctgaagtccgcatggaaacgcgtagcatcattgct
cgtccggcagcctga
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