Klebsiella sp. PCX: GQR96_19940
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Entry
GQR96_19940 CDS
T11064
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
klx Klebsiella sp. PCX
Pathway
klx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
klx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GQR96_19940 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
klx03400
]
GQR96_19940 (recB)
Enzymes [BR:
klx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GQR96_19940 (recB)
DNA repair and recombination proteins [BR:
klx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GQR96_19940 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_11
Ig_mannosidase
Motif
Other DBs
NCBI-ProteinID:
UKB71321
LinkDB
All DBs
Position
complement(4195159..4198695)
Genome browser
AA seq
1178 aa
AA seq
DB search
MTDTAESLDPLRLPLRGERLIEASAGTGKTFTIAALYLRLLLGLGGEAAYPRAISVEELL
VVTFTEAATEELRGRIRSNIHELRIACMRGESDNPLYSALLAEIVDKEDAVKTLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESRLRYQACADFWRRHCYPLTRDIA
AVIHDVWKGPRDLLKSLDRWLQGEAPQLKSPPAADETLAERHQQIIDRIDSLKQQWREQV
GEIEGVLEDSGLDRRKFNRGNQGKWLEKVTAWAQEETLSYQLPDALEKFAQSFLLERTKA
GGEPPVHPLFSAVESLLASSLTLTDLVLARAMVEIRDAVAREKRRRGELGFDDMLSRLDE
ALRGDSGEALASAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRQQPETALLLIGDPKQAIY
AFRGADIFTYMKARGDVAAHYTLDTNWRSSPGMVGSVNRLFSLSDNPFMFREIPFLPVKA
AAKNQGLRFTVDAADVPAMNVWLMPGDTVGAGDYQTFMAQLCATQIRDWLSAGQQGRALL
WRGETSRPVQASDITVLVRNRLEAAQVREALQTLGIPSVYLSNRDSVFETLEAQELLWLL
QAVLSPERENTLRSALATSMFGLTALDIENLNQDEQAWDALVEEFSEYRQIWRQRGVMPM
LRALMTARHIAENLLATRGGERRLTDILHISELLQEAASQLESEHALVRWLTQHIAEPDS
NAASQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQDQAFYHDRETFAAVLDL
GQDEASLELAEAERLAEDLRLLYVALTRAVWHCSLGVAPLSSRKSGNSDFHLSALGRLLQ
AGEAMDAAGLAARLADFCHGDIALQRPGELDLTPWQAPAASIPPLSARELQRRIADDWRV
TSYSGLQQHGFSSGQDLLPRLDIDAVGVGEVVEEPQLTPHQFPRGAAPGTFLHSLFEELD
FTQPVPDGWMAEKLQLSGFDAQWAPVLTDWLGGVLKTRLPGPDIALNQLAARDKQVEMAF
YLPIAQLLTAERLDALIRQYDPLSADTPPLDFRQVRGMLKGFIDLVFRHEGRYYLLDYKS
NWLGEDREAYTRPAMEQAMRAHRYDLQYQLYSLALHRYLRHRLADYDYDRHFGGVIYLFL
RGMDGQEGGQGIFTTRPVRPLIDGLDQLFAGETQEEAS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgctgagtctttggatcccctgcgcttgcccttgaggggcgagcgcctg
atagaagcctctgcgggcaccggaaaaacctttaccatcgccgcgctgtatctgcggctg
ctgctggggctgggcggcgaggcagcctatccccgcgccatcagcgttgaagaactgctg
gtggtgacctttaccgaggcggcgaccgaagagctgcgcgggcgtatccgcagcaacatc
cacgagctgcgcatcgcctgtatgcgcggtgaatccgataacccgctctacagcgcgctg
ctggcggagatcgtcgataaagaggacgccgtaaagacattgctgctggctgaacggcag
atggacgaggcggcggtgttcaccatccacggtttttgccagcggatgctgagccttaac
gccttcgaatcgggcatgctgttcgagcagcagctaatagaggatgaatcccgcctgcgc
tatcaggcctgcgccgacttctggcgccgtcactgttatccgctgacccgcgatatcgcg
gcggtgatccacgatgtctggaaagggccgcgcgatctgctgaagtcccttgaccgctgg
ctgcagggcgaagcgccgcagcttaagtcgccgccagccgccgacgagacgctggccgaa
cgccatcagcaaatcatcgaccgcattgactcgctcaagcagcagtggcgcgagcaggtg
ggcgagatcgaaggcgtgcttgaagattcgggtcttgaccggcggaagttcaatcgcggc
aaccagggcaaatggcttgagaaagtgaccgcctgggcgcaggaagagacgttgagctat
cagttacccgacgcgctggaaaaatttgcccagtcgtttctgcttgagcgtaccaaagcc
ggtggcgaaccgcccgtacatcctctgtttagcgccgtagaatcgctgctggcctcgtcg
ctgacgctcaccgatctggtgctggcgagagcgatggtcgagatccgcgatgcggtcgcg
cgcgaaaagcgccgccgcggcgagctggggtttgacgatatgctcagccggcttgacgag
gcgctgcgcggcgacagcggcgaggcgctggctagcgccattcgccagcgttttccggtg
gcgatgatcgacgaatttcaggataccgacccccaacagtaccggattttccgccgtatc
tggcgccagcagccggagacggcgctgctgctgatcggcgatccgaagcaggccatctac
gcctttcgcggcgccgatatctttacctatatgaaagcgcgcggcgacgttgccgcgcac
tacacgctagacaccaactggcgctcctcgccgggcatggtgggcagcgtcaaccggctg
ttcagcctcagcgataaccccttcatgtttcgcgagatcccgttcctgccggtgaaggcg
gcggcgaagaaccaggggctgcgctttaccgttgacgcggcggacgtaccggcgatgaac
gtctggttgatgcccggcgacaccgtgggcgccggcgattatcagacgtttatggcgcag
ctctgcgccacgcagatccgcgactggctgagcgccggtcagcaggggcgcgcgctactg
tggcgtggggaaacctcgcgcccggtgcaggcttcggatattaccgtgctggtgcgcaac
cggctggaggcggcgcaggtgcgtgaagcgctgcagacgctgggcatcccttcggtctac
ctctccaaccgcgacagcgtttttgagacgctggaggcccaggagctgctctggctgctg
caggcggtgttgtccccggagcgggaaaataccctgcgcagcgcgctggcgacctcgatg
tttggcctgaccgcgctggatattgaaaatctcaatcaggatgagcaggcgtgggacgcg
ctggtggaggagttcagtgaataccgtcagatctggcgtcagcgcggggtgatgccgatg
ctgcgggcgctgatgacggcccggcatatcgccgagaacctgctggcgacccggggcggc
gagcggcgcttaaccgacatattgcacatcagcgaactgctgcaggaggcggccagccag
ttggaaagcgagcacgccctggtgcgctggctgacgcagcatatcgccgagccggacagc
aacgccgccagccagcagatgcgtctggaaagcgataagcacctggtgcaaatcgtcact
attcataagtcaaaagggctggaatatcccctggtctggctgccgtttatcgcccggttt
cgcaaacaggaccaggcgttctatcacgatcgcgagacgttcgcggcggtgctggatctg
ggccaggatgaggccagcctcgaactggcggaggcggagcggctggcggaagatctgcgc
ctgctgtacgtcgccttgacccgcgcggtctggcactgcagcctcggcgtagcgcccctc
agcagccgaaagtccggcaacagcgattttcatctgagcgccctggggcggctgctgcag
gcgggcgaagccatggatgccgccgggctggccgcgcgcttagcggacttctgccatggc
gatattgcattgcagaggccgggcgagctggatctgaccccgtggcaggcgccggcggcg
agcatccccccgctgtcggcgcgcgagctgcagcgccgcatcgccgatgactggcgggta
accagctattccggtctgcagcagcatggcttcagcagcgggcaggatctgctgccacgt
ctggatatcgatgccgtcggcgtcggcgaggtggtggaagagccgcagctgaccccgcac
cagttcccgcgcggcgctgcgccggggaccttcctgcacagtctgtttgaggaactggac
tttacccagccggtgccggacggatggatggcggagaaactgcagctgagcgggtttgac
gcacagtgggcgccggtgctgaccgactggctggggggcgtgctgaagacccgcctgccg
gggccggatatcgcgctcaatcagcttgcggcgcgggataaacaggtggaaatggcattt
tacctgcccatcgcgcagctgctgacggcggagcgccttgatgcgcttatccgccagtac
gatcccctttccgccgacacgccgccgctggatttccgccaggtgcgcggcatgctgaag
ggttttatcgatctggtcttccgccacgaaggccgctattacctgctggattacaaatcc
aactggctgggggaagatcgcgaggcctatacccggccagcgatggagcaggcgatgcgg
gcccaccgctacgatctgcagtatcagctgtacagcctggcgctgcaccgctatctgcgc
catcggctggccgattacgactatgaccgccacttcggcggcgtgatttatctcttcctg
cgcggcatggacggtcaggagggggggcaggggatcttcactacccggccggtgcgaccg
ctgattgacggtctggatcagctttttgccggagaaactcaggaggaggcctcatga
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