Klebsiella sp. PCX: GQR96_21905
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Entry
GQR96_21905 CDS
T11064
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
klx Klebsiella sp. PCX
Pathway
klx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
klx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GQR96_21905 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
klx03019
]
GQR96_21905 (pnp)
03016 Transfer RNA biogenesis [BR:
klx03016
]
GQR96_21905 (pnp)
Enzymes [BR:
klx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GQR96_21905 (pnp)
Messenger RNA biogenesis [BR:
klx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GQR96_21905 (pnp)
Transfer RNA biogenesis [BR:
klx03016
]
Prokaryotic type
tRNA degradation factors
GQR96_21905 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
DUF4172
Motif
Other DBs
NCBI-ProteinID:
UKB71674
LinkDB
All DBs
Position
complement(4582877..4585012)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKSSKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQNINDLVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPTIEE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAQHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTPSAAAPEVPAAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggccagcataccgtgaccctggaaacc
ggcatgatggcgcgccaggcaacggccgctgtgatggttagcatggatgacactgcggta
ttcgtgaccgttgtgggccagaaaaaagcgaagccaggccaggactttttcccgctgacg
gttaactaccaggagcgtacctacgctgccggtaaaatcccgggtggtttcttccgtcgt
gaaggccgcccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgc
ccgctgttcccggaaggcttcgttaacgaagtacaggttatcgccaccgttgtttccgtt
aacccgcaggttaacccggatatcgtcgcgatgatcggcgcttccgcagcgctgtccctg
tctggtattccgttcaatggcccaatcggcgccgcgcgcgtgggttacatcaacgaccag
tacgtactgaacccgacccaggaagagctgaagtccagcaaactggatctggtggtggcc
ggtaccgaagcggccgtactgatggtggaatccgaagcggaactgctgagcgaagaccag
atgctgggcgcggtggtctttggccacgagcagcagcagattgttatccagaacatcaac
gacctggtgaaagaagccggtaaaccacgttgggactggcagccggaagccgtcaacgaa
gcgctgaacgcgcgcgttgctgcgctggctgaatcccgcctgagcgatgcttaccgtatc
accgacaaacaagagcgttacgctcaggttgatgtgatcaaatctgaaaccatcgctacg
ctggttgcagaagatgaaaccctggacgctaacgaactgggtgaaatcctgcacgctatc
gagaaaaacgtggttcgtagccgcgtgctggccggtgagccgcgtatcgatggtcgcgaa
aaagatatgatccgtggtctggacgttcgtaccggcgttctgccgcgtactcacggttcc
gcactgttcacccgtggcgaaacgcaggcgctggttaccgcgacgctgggtaccgcacgc
gatgcgcagaacatcgatgaactgatgggcgagcgtaccgactccttcctgttccactac
aacttccctccgtactccgtaggtgaaactggcatggtggggtctccgaagcgtcgtgaa
atcggtcacggtcgtctggctaagcgcggcgttctggccgtgatgccgactatcgaagaa
ttcccgtacaccgtacgggtggtgtctgaaatcaccgaatctaacggctcttcttccatg
gcttccgtctgcggtgcctctctggcgctgatggacgctggtgtgccggtgaaagccgcc
gtggcgggtatcgccatgggtctggtgaaagaaggcgacaacttcgtcgtgctgtctgac
atcctcggtgacgaagaccaccttggcgatatggacttcaaagtagcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagaaatcatgcag
gttgcattgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggagcaggcg
attaacgcgccgcgcggcgatatctctgaattcgcaccgcgtatccataccatcaagatc
aacccggacaagatcaaagacgttatcggtaaaggcggttctgttatccgtgccctgacc
gaagagaccggtaccaccatcgaaatcgaagatgacggtaccgtgaagatcgcagcgact
gacggcgacaaagcacagcatgctatccgtcgtatcgaagagatcaccgctgagatcgaa
gttggccgtatctacaatggtaaagtgacccgtatcgttgactttggcgcgttcgttgcc
atcggcggcggtaaagaaggtctggttcacatctcgcagatcgctgacaagcgcgttgag
aaagtgactgactacctgcagatgggtcaggaagtgccggttaaggttctggaagttgac
cgccagggccgtgtccgtctgagcatcaaagaagcaactgaacagactccgtctgccgca
gcgccggaagttccggctgccgagcagggcgagtaa
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