Kushneria marisflavi: B9H00_00870
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Entry
B9H00_00870 CDS
T04840
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
kma
Kushneria marisflavi
Pathway
kma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9H00_00870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kma03019
]
B9H00_00870
Enzymes [BR:
kma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B9H00_00870
Messenger RNA biogenesis [BR:
kma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9H00_00870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ART61790
UniProt:
A0A240UL95
LinkDB
All DBs
Position
complement(176803..178161)
Genome browser
AA seq
452 aa
AA seq
DB search
MSESENSQPAQTSAEAPANANRRPKRRRRKPRRSQSRNNAQTGSVQGNQASGSDNHTALP
EVPAVAGKWRFQDFNLPMPLMQAIADQGFHYCTPIQAEALRHTLLGGDVVGKAQTGTGKT
AAFLISILAYFLEEPAPNGQKPGAPRALIIAPTRELAMQIEKDARALMTHTSLRVASAVG
GMDYQKQRQKLEKPLDILVATPGRLLDFHQKRDADLSQVEVLVLDEADRMLSMGFIPDVK
RIIRATPKSTERQTFLFSATFTQDILNLASQWTHEPAHVEIEVDASAAANIDQRVYLVSD
AEKFTILRRLIEREKLEKVMVFANRRDLVRKLDDRLRKAGINVAMLSGDVPQKTRVSTLE
RFREGKVAVLVATDVAGRGIHINDISHVVNYTLPDDPEDYVHRIGRTGRAGAQGTSISFV
GEEDGYALPEIEAYIKDRLPCQQPPANLLSDD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtcggaaaactctcagccggcacagacgtcggcggaggctcccgccaatgcc
aatcgtcggcccaagcgccgtcgtcgcaagccccggcgcagccagtcccgcaacaatgct
cagaccggcagcgttcagggcaatcaggcgtccgggagcgacaaccataccgctttgccg
gaagtcccggccgtggcaggcaagtggcgttttcaggatttcaatctgccgatgcccttg
atgcaggccatcgccgatcagggcttccattactgcaccccgatccaggccgaagcgctg
cgccatacgctgctgggtggtgacgtggtcggcaaggcgcagacaggcaccggcaagacc
gcggcctttctgatttcgattctggcctatttcctggaagagccggcaccaaatggccag
aaaccgggcgcgccccgggcgctgatcattgcgccgacgcgtgaactggccatgcagatt
gaaaaggatgccagggcgctgatgacccatacctcgctgagggtggccagtgcggtgggt
ggcatggattatcagaagcagcgccagaagcttgaaaagccgctagacattctggtggcc
acgcccggtcgtctgctcgactttcatcaaaagcgcgacgccgatctttcccaggtggaa
gtgctggtgctggatgaagccgatcgcatgctctcgatgggctttattccggacgtcaag
cgcatcattcgtgccacgcccaaaagcaccgagcgccaaaccttcctgttctcggccacg
tttacccaggacattcttaacctggccagtcagtggacgcatgaaccggcacacgtcgaa
attgaagtcgatgccagcgccgctgccaacattgatcagcgggtctatctggtcagcgat
gccgagaaatttaccattctcaggcgtctgatcgagcgtgagaagctggagaaggtgatg
gtcttcgccaatcggcgtgacctggtacgcaagctcgatgaccgtttgcgcaaggcgggc
atcaatgtggccatgctctccggtgacgtgccgcagaaaacacgcgtcagcacgctcgaa
cgctttcgcgaaggcaaggttgccgtactggtggccactgatgtggccggtcgtggcatt
cacatcaacgacatcagccacgtcgtcaactacacgctgcccgacgatccggaagattat
gtccatcgtatcggccgaaccggccgcgccggcgcacagggcacctcgatcagctttgtc
ggtgaagaagacggctatgcgttgccggaaatcgaagcctacatcaaggatcggctcccc
tgtcagcagccgccggccaatctgctcagtgatgactga
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