Kushneria marisflavi: B9H00_02080
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Entry
B9H00_02080 CDS
T04840
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kma
Kushneria marisflavi
Brite
KEGG Orthology (KO) [BR:
kma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kma03016
]
B9H00_02080
Enzymes [BR:
kma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
B9H00_02080
Transfer RNA biogenesis [BR:
kma03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B9H00_02080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ART62007
UniProt:
A0A240UKH8
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Position
436761..438719
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AA seq
652 aa
AA seq
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MLSNNSQLAQLKQQIREKTPRVTGVIKATDKGYGFLETDDGQSFFVPPPAMKQVVHGDRV
EAVLNEEKERKSVEPESLIEAGLSRFIGRVKKRDGRLSVVPDHPSINTALRARTHRSIEE
SSLNEGDWVVVHLLRHPLRENDRGFFVQVDEIIAEGTHPSVPWRVTLARHALEQASPDAG
DQWPMREEGLERRDLTDVPFFTIDNATTTDMDDALSVEALDNGRFRMKVAIADPTAYVEP
GDRVDQEARQRAFTVYLPGQNVTMLPEPLADDLCSLKQDEDRPALVCTLEVGADGVIGEY
HFEAATVRSKARLNYEQVSDYIEALEASTTPVWAPMFEQGEAQLKALAGLTQARQSWRQQ
HALVFADRPDYVFKLDDTGNVLDIVTEERRIGHRMVEEAMIAANVCCASLLSEHVGHGIF
NVHQGIATEKAEQAQAFLASQSVEATQEQFNDIAAWRTLRHQLDERKDAWLDARLRRFQG
YSVMQTEPGPHFGMGLPAYATWTSPIRKYGDMINHRLIKQVLRGDAEHDKAAEVAVTDHL
SERRRLNRMAERDVKDWLYVRYLADAVTSETPFEGEIVDIRRGGLRVRLPANGASAFVPA
SMLHTDRDAVSIDDKEGLITIDGELRYRLGDMLNVVLIEAREETRSLVARPA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgctctcgaacaacagccagctcgcccagctcaagcaacagatccgtgaaaaaacgccc
cgcgtgaccggtgtgatcaaggccaccgacaagggctacggctttctggaaaccgacgac
ggccagtcctttttcgtgccgccccccgccatgaagcaggttgtacacggtgatcgtgtc
gaggccgtgctcaatgaggagaaagaacgcaagagtgtcgagccggaaagtctgatcgaa
gccggactcagtcgcttcatcggtcgcgtcaaaaagcgtgacgggcgtctatctgtcgtt
cctgatcatccctccatcaatacagcgctgcgggctcgcacccatcgcagtatcgaggag
agctcgctcaacgaaggtgactgggtggtggttcatctgcttcgccacccgctacgtgaa
aacgatcgcggctttttcgtccaggtcgatgagatcatcgccgaagggactcatccgtcc
gtcccatggcgggtcactctggcacgtcatgcgctggagcaggcttcacccgacgccggc
gatcaatggccaatgcgtgaggagggtctggaacgtcgtgatctgaccgatgtgcccttt
ttcaccatcgacaacgccacgaccaccgacatggacgatgccctcagcgtcgaagcactg
gacaacggtcgcttccgcatgaaggtcgccattgccgaccccacggcctatgtcgaaccg
ggtgatcgcgtcgaccaggaagcccgtcagcgcgccttcaccgtctatctgccgggtcag
aacgtcaccatgctgcccgagccgctggccgatgacctgtgctcgctgaagcaggatgaa
gaccggcctgcgctggtctgtacgcttgaagtcggtgccgatggcgtcatcggtgagtac
cactttgaagcggctaccgtacgctcgaaggcccgcctgaactacgagcaggtctctgac
tacatcgaggcgcttgaggcaagcacgacaccggtttgggcgccaatgtttgaacagggc
gaggcgcagctcaaggcgctggccggcctgacgcaggcacgccagagctggcgtcagcag
catgcgctggtctttgccgaccgccccgactacgtcttcaagctcgatgacaccggcaac
gtccttgatatcgtcaccgaagagcgccgcatcggccatcgcatggtggaagaggccatg
attgcggccaacgtctgctgcgcgagtcttctcagcgagcacgttggccatggcatcttc
aacgttcatcaggggattgccactgaaaaggccgagcaggctcaggcatttctggccagc
cagtcggttgaggcgacccaggaacagttcaacgacatcgccgcctggcggacactgcgc
catcagctcgatgagcgcaaggatgcctggcttgatgcacgccttcgccgctttcagggc
tatagcgtcatgcagacagaaccgggcccgcacttcggcatggggctgccggcctacgca
acatggacgtcgccgatccgcaaatacggcgacatgatcaatcaccgcctgatcaagcag
gtgctgcgaggtgacgccgagcacgacaaggcagccgaagtggccgtgaccgatcacctg
agcgagcgtcgtcgcctgaaccgcatggcagagcgtgacgtcaaggactggctctatgtc
cgctatctggccgatgccgtgaccagcgagacaccctttgaaggcgaaatcgtcgacatt
cgccgcggcggcctgcgtgttcgtctgcccgccaacggtgcctcggcctttgtccctgct
tccatgctgcacaccgaccgtgacgccgtcagcatcgatgacaaggaaggtctgattacc
atcgacggtgaattgcgctaccgtctgggcgacatgctcaatgtcgtgctgattgaagcc
cgtgaagagacccggtcgctggtggcacgccctgcctga
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