Kushneria marisflavi: B9H00_02295
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Entry
B9H00_02295 CDS
T04840
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
kma
Kushneria marisflavi
Pathway
kma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B9H00_02295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kma03400
]
B9H00_02295
Enzymes [BR:
kma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B9H00_02295
DNA repair and recombination proteins [BR:
kma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B9H00_02295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_11
AAA_25
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ART62046
UniProt:
A0A240ULP1
LinkDB
All DBs
Position
complement(484101..487964)
Genome browser
AA seq
1287 aa
AA seq
DB search
MAPGARRWCNAVMTTSLDIPTLPLNGRRLIEAGAGTGKTFTLAALYVRLVLGHGGDAAYP
RPLMPPEILVVTFTEAATEELRDRIRARLRQAREVLLGRADSDVVLDRLLADIAPLDRER
AASRLDAAARVMDDAAIFTIHGFCQRMLKRHAFDSGALFASELVPDSSALFKSLVEDYWR
RQFYRQSTARQRLLAQWWETPDQLRQEISLLLHGGRPRALMLGETLIHAPATLEGALDRL
DQGLAQRDAQLTRLRALWQAESDDITALLREAIEGGALKANMFKPLDLAARLETLRQWMT
GEQETPDETLRDSKGRLWCSRERLEDGVKKNHAPPAHAFFEALSQFERLVEDQRDQQATV
RAQVLAHARDALAQSLSQEKRRRGMWDFDDLLNSLDDALAGPAGPRLAERIRRNLPVAMI
DEFQDTDPVQYRIFSTIYARPQQTTELALGEDESFGADSSMMDASEVPAALLMIGDPRQA
IYGFRGADIETYLQARRHVNQRYTLDRNFRSTQAMVSAVNQLFATEAPFQLEEIPYEPVT
AQGRNEVFIEAGQPVDALTFWHMDDQTSVKRDDYLETMATATCADITRLLWGARRGETGF
RSHDGTFRPLKPADIAILVRTGSEAMRVRQKLLEGGVRSVYLSQKTSVFESREAFHLLQL
LEACAHPRDDRSLRAALATRLMSDSLSEVARLEADELAWEAMVERFDGYHRLWQRQGVLP
MLRVIMRDFDVPARLLAQSDGERALTDVLHLGELAQTASAQLDGEQALLRWWHQSLAGRF
DSGMDPQSLILRLESDDTLVRVITIHKSKGLEYPLVYLPFIADYREVDSKSKTLMLSDDT
HGASLVMQVNDEQRARADRARRQEDLRLLYVALTRARYLCRLGIGPIYKGAARKDTPSGA
TTLAGAALGALLCQHGHHASLDTDSLKAVLGSLESPGSIALIAPPTLTGKSALAPQASSQ
AGRARRFEGRIDRDWWVASYTALVEGARQPGDLTGQAREAMLEDQIPMLDLEVLTETSPI
PLPPVRRLLDFPRGPRAGTFLHALLENIEPDRLGELATPGSSYWEALHRLIRQRVQRGNL
DPHWIEVLHDWCCAVLTAPLHPSLPGLSLERLDGWRTELEFWLPARGISSRRLDALICQH
EPLPGIRAELAPRTLAGMLKGYIDLVIEHDGCFYVLDWKSNHLGDTLEAYDQAAMVASVV
SHRYDVQYVIYTLALHRHLRSRLPDYDYDRHLGGVLYLFLRGMTAEGGRGVLYRKPAREL
IEQLDHLLAQGERTHSETQAVDSGALS
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggcacccggggcgcggcgatggtgtaatgcggtcatgaccacatcgcttgatatcccg
acgctgccgctcaacggtcgccgcctgatcgaggccggcgccggcaccggcaagaccttt
accctggccgcgctctatgtgcggctggtgctgggccatggtggtgacgccgcttatccg
cgtcctctgatgccgccggaaattctggtggtcacctttaccgaggccgccaccgaagag
ctgcgcgatcgtattcgcgcacgactgcgtcaggcccgcgaggtgcttttgggccgtgcc
gacagcgacgtcgtgctggaccgcctgctggcagacattgccccgttggatcgcgaacgg
gccgcctcgcggctcgatgcggcagcgcgcgtgatggatgacgcggccatcttcaccatc
catggcttttgccagcgcatgctcaagcgccacgcctttgacagcggagcgctgtttgcc
agtgagctggtgccggacagcagtgctctgttcaagtctctggtggaagattactggcgc
cgtcagttttatcgacagtccacggcgcgtcagcggttgctggcgcaatggtgggagacc
cccgatcagctgcgtcaggagatcagcctgttactccatggtgggcgcccccgggcgctg
atgctgggggagacgctgattcatgcccccgcaaccctggagggcgcgctggatcggctg
gatcaggggctggcccagcgcgatgcccaactgacgcgactacgtgcgctgtggcaggcc
gaaagtgatgatattacggcgctgctgcgagaggccatcgagggtggggcgctcaaggcc
aacatgttcaaaccgttggatctggcggcgcgtcttgagaccttgcggcaatggatgacg
ggcgagcaggagacgccggacgagacgcttcgggattcgaaagggcggctgtggtgttcg
cgcgagcgcctggaggatggcgtcaaaaaaaatcacgccccaccagcgcatgcctttttc
gaggcgctctcgcagtttgagcggctggtagaagaccagcgcgaccagcaggctactgtg
cgcgcacaggtactggcccatgctcgggatgcgctggcgcagtcgctgagtcaggaaaag
cgccggcgcggcatgtgggattttgatgatctgctcaatagccttgatgatgcgctggcg
ggaccggccggcccgcgactggccgagcgcattcgacgcaacctgccggtggcgatgatc
gatgagtttcaggataccgacccggtccagtaccgcatcttttccaccatctatgcacgg
ccgcagcagacgacggaactggcgctgggggaagatgagtcgttcggggcagattcatcg
atgatggacgcctccgaggtgccggctgcgcttttgatgatcggcgacccacgccaggcc
atttacggatttcgcggcgccgatatcgagacctatctgcaggcgcgtcgccatgtgaat
caacgctatacgctggatcgcaactttcgctcgacgcaggccatggtcagcgccgtcaat
cagctctttgcaaccgaggcacctttccagctcgaagagattccctatgagccggtcacg
gcccagggacgcaatgaagtctttatcgaggccggccagccggtcgatgccctgaccttc
tggcacatggacgaccagacgtcggtcaagcgcgatgactatctcgagaccatggcgacg
gccacctgtgccgacattacccggctgctgtggggggctcgacgtggcgagaccggtttt
cgcagccatgatgggaccttcaggccgctcaagcctgccgatatcgccattctggtgcgt
accggcagtgaggccatgcgggtacgtcaaaagcttctggagggcggcgttcgctcggtt
tatctgagccagaaaacgtcggtgttcgagtctcgcgaagcgtttcatttactgcagctg
ctggaggcctgtgctcacccgcgtgatgaccgttccctgcgcgcggcgctggccacacga
ctcatgagcgattcgttgtcggaggtggcgcgactggaggccgacgagctggcctgggag
gcgatggtagagcgctttgatggctaccatcgcctctggcagcgtcagggcgtgctgccg
atgctgcgtgtgatcatgcgcgatttcgacgtgccggcacggcttctggcgcagtccgac
ggtgagcgggcgctaaccgatgtgctgcatctgggcgagctggcacaaacggccagtgcg
cagctcgatggggagcaggcactgctgcgctggtggcatcagtcgctggccggccgcttt
gatagtggcatggacccgcagtccctgattctgcggcttgaaagtgacgataccctggtg
cgggttatcaccatccacaagtccaagggacttgaatatccgctcgtttatctgcccttc
attgccgattaccgtgaagtggacagcaaaagtaaaacgttgatgttaagcgatgacacc
catggtgcctcgctggtcatgcaggtcaacgatgagcagcgcgccagggctgatcgcgcg
cgtcggcaggaggatctgcggcttttgtatgtggcgctgacgcgggcgcgctatctgtgc
cgcctagggatcgggccgatttacaagggggccgcgcgcaaggacaccccgagtggtgcc
acgacgctggccggagccgcgctcggcgcgctgctgtgtcagcacggtcaccatgcgtca
ctggacacggacagcctgaaggcagtgctgggctcactggaaagcccgggcagtatcgct
ctgatcgcaccaccaacgctgacggggaagtcagccctggcgccgcaggcgtcatcgcag
gcaggtcgggcacgtcgatttgaagggcgcattgatcgggactggtgggtggcgtcctat
accgctctggtggagggcgctcgccagccgggcgatctgaccggtcaggcgcgtgaagcg
atgctggaggatcagatacccatgcttgatctggaagtgctgacggaaaccagccccatt
cccttgccaccggtacggcgtctgctcgattttccacgtggtccgcgggcgggcaccttt
ctgcacgcgctgctggaaaacattgaacccgaccgtctgggcgagcttgccaccccggga
tcgagctattgggaagcgcttcatcgactgattcgtcagcgcgtgcagcgtggcaacctg
gacccgcactggatagaggtcctgcacgactggtgctgtgcagtgctgacagcgccgctg
catccgtccctgccagggttgtcgcttgaacggctcgatggctggcgcaccgagcttgag
ttctggctgccggcccgcggcatcagtagccggcggctggatgcgctgatttgccaacac
gaaccgctgccgggcatccgcgcggaactcgcccccagaacgctggccggaatgctcaag
ggctatatcgatctggtgatcgaacacgatggatgcttttacgtgctcgactggaagtcc
aaccatctgggggacacgcttgaggcctatgatcaggccgccatggtggcttcggtagta
tcgcatcgctatgacgtgcagtacgtcatctacaccctcgcgctgcatcgccatctcagg
agccggttgccggattacgactatgatcgccaccttggtggggtgctctatctcttcttg
cgcggcatgacggcggaaggtggtcgaggcgtgttgtatcgaaagccggcccgtgaactg
atcgagcagcttgatcacctgctggctcagggcgagcgcacgcattctgaaacacaagcc
gtcgattcaggagcactgtcatga
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