Kushneria marisflavi: B9H00_02495
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Entry
B9H00_02495 CDS
T04840
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kma
Kushneria marisflavi
Pathway
kma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9H00_02495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kma03019
]
B9H00_02495
03009 Ribosome biogenesis [BR:
kma03009
]
B9H00_02495
Enzymes [BR:
kma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B9H00_02495
Messenger RNA biogenesis [BR:
kma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9H00_02495
Ribosome biogenesis [BR:
kma03009
]
Prokaryotic type
rRNA helicases
B9H00_02495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
CMS1
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ART62080
UniProt:
A0A240UM36
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All DBs
Position
complement(534078..535805)
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AA seq
575 aa
AA seq
DB search
MTSTSVASPTFGDMALLPAVLESLVSLGYETPSPIQAQTIPSLLEGADLLGQAQTGTGKT
AAFALPLLSRLDLDRREPQVLVLAPTRELAQQVAVAFSRYGQNIKGLEVVTLCGGQDYRE
QMRGLKSGGQIVVGTPGRVIDHLDRGSLSLTGLNALVLDEADEMLRMGFIDDVKRVLKDT
PTDAQRVFFSATLPPEISRIVSRYLVDPITVQIEARAATTTIQQRVCRVEGPAKIEALAR
IIEVEPVDAAIVFVRTRASCTTLVDQLVARGIAAAPLSGDLDQSLRERTVQRLKKGKVDV
LVATDVAARGLDVPRITHVINFDMPHDTEAYIHRIGRTGRAGREGTAIAFAGNREVRKIR
WLEQATGQKIDIMELPDEKTMRAHRDEKFKARAEAMLERGHEHQRAMVESLLEEGIDPID
LACVFASLARAGEPPIRSLPKSNPRSERPERGERSERGGERRPPRRREGGPSEGMTRYRL
AVGHRDNIKPGQLVGALANEGGIEGARIGRIDIRQTHSLVELPTSLPETVLAKMARARVG
GRQLEISKDAGRPEGGQSEGRSERPRRDDRRQQAS
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacttctacttccgttgcctcgccgactttcggtgacatggcgctgctgcctgctgtt
ctcgaatctcttgtatctctgggttatgaaaccccgtcacccattcaggcgcagaccatt
ccatcgcttctggaaggcgctgaccttttgggtcaggcgcaaaccggtaccggcaaaacg
gcagcctttgccttgccgctgctctccaggctggatcttgatcgtcgtgagccgcaggta
ctggtactggccccgacacgcgaactcgcccagcaggttgccgtggccttcagccgctac
ggtcagaacatcaagggccttgaggtcgtgacactctgcggtggtcaggactaccgcgaa
cagatgcgcggcctgaaaagcggcggccagatcgtcgtgggcacgccgggtcgtgtcatc
gaccacctggatcgtggttctctgagcctgaccggcctgaatgcgctggttcttgatgaa
gccgacgaaatgcttcgcatgggcttcattgatgacgtcaagcgcgttctcaaggacacc
ccgaccgatgcgcagcgcgtgttcttctccgccacgctgccgccggaaatttcacgtatc
gtcagccgctatctggttgacccgatcacggttcagatcgaagcgcgtgccgccacgacc
accattcagcagcgcgtctgccgcgtggaaggcccggccaagattgaagcgctggcacgt
attatcgaggtcgagccggttgatgcagccattgtcttcgtgcgtacccgtgcgtcctgc
accacgctggtcgatcagctggtcgctcgtggtatcgctgcggcgccgctgtccggcgac
ctggatcagagcctgcgtgagcgcacggttcagcgcctgaaaaagggcaaggtcgacgtg
ctggttgccaccgatgtggccgcacgtggcctcgacgtgccgcgtatcacgcatgtcatc
aactttgacatgccccacgataccgaagcctatattcaccgtatcggtcgtaccggccgt
gccggtcgcgaaggcacggcaattgcctttgccggtaatcgtgaagtccgcaagattcgc
tggctcgagcaggccaccggccagaaaatcgatatcatggagcttcccgacgagaagacc
atgcgtgcgcatcgcgacgagaagttcaaggcccgtgccgaggccatgcttgagcgcggt
catgagcatcagcgtgcgatggtggaatcgctgctggaagagggcatcgatccgatcgat
ctggcctgcgtctttgcaagccttgcccgtgccggcgaaccgccgattcgttcactgccg
aaatccaatccgcgcagcgagcgtcccgaacgtggcgaacgctccgagcgtggcggtgag
cgtcgtccgccgcgtcgccgcgaaggtggcccgagcgaaggcatgacccgttatcgtctg
gccgtcggccatcgcgataacatcaagccgggacagctggtgggtgctctggccaatgaa
ggcggtatcgaaggcgcccgtattggtcgcatcgacattcgccagacccacagcctggtt
gaactgcccaccagtctgcccgagaccgtactggccaagatggcacgtgctcgtgtcggc
ggtcgtcagctggaaatcagcaaggatgccggacgccccgagggtggtcagagcgaaggt
cgcagcgagcgcccgcgtcgtgatgatcgtcgtcagcaggcctcctga
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