Kushneria marisflavi: B9H00_08225
Help
Entry
B9H00_08225 CDS
T04840
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kma
Kushneria marisflavi
Pathway
kma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9H00_08225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kma03019
]
B9H00_08225
Enzymes [BR:
kma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B9H00_08225
Messenger RNA biogenesis [BR:
kma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9H00_08225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Utp25_C
Herpes_capsid
Gag_p24
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ART63038
UniProt:
A0A240UNI4
LinkDB
All DBs
Position
complement(1799117..1800493)
Genome browser
AA seq
458 aa
AA seq
DB search
MSFSQLGLSPELLRALEDAGYQTPSPIQSKAIPACLEGRDVLAAAQTGTGKTAGFTLPIL
ERLSREPQGHKRPVRALILTPTRELAAQIGESVEKYGVHLKPRLKSDVVYGGVKVNPQIA
RLRDGVDVLVACPGRLLDLVNQKAVRLDQVETLVLDEADRMLDMGFIHDIKKILRLVPKK
RQNLLFSATFSKEIRELAGTLLDNPVSIDVAPRNTAAESVDQSIYMVEKPQRMALLTHLI
THHQWSQALVFTATKHMANRVTQHLQKAGITAAAIHGNKSQNARTAALSGFKSGEVQVMV
ATDVAARGIDISELPNVVNFELPKTPADYVHRIGRTGRAGASGQAVSLVMPDERGQLKQI
EKLIGRAIPVASAEGFDFSRAVPETPDEREQRPGGGQRRQGSGRNNGGGARSGGGAGRSG
PGNRSRSGGNGGSGDEQARPARRRRRSGPRTADNSGNR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttcccaacttgggctgtcgcccgagcttttgcgtgctctcgaagatgctggc
taccagacaccttctcccattcagtccaaggccattccggcctgtcttgaaggtcgcgat
gtgttggcggccgcccagaccggtaccggcaagacggccggcttcacgctgccgattctg
gagcgattgtcgcgtgagcctcagggccacaagcgtccggtgcgcgccctgatcctgacc
ccgacgcgtgagcttgccgctcagatcggtgagtcggtcgagaagtacggcgtccatctc
aagccgcgtctgaaaagtgatgtggtctacggcggcgtcaaggtcaatccgcagatcgcg
cgactgcgcgatggtgtggatgtgctggtggcctgcccgggccgtctgctggatctggtc
aatcaaaaggccgtgcgactcgatcaggtcgaaaccctggtgcttgatgaagccgaccgc
atgctggacatgggctttatccacgacatcaagaagatcctgcgcctggtgcccaaaaag
cgtcagaacctgctcttttccgcgaccttctcaaaagaaattcgcgagctggccggcacg
ctgctggacaacccggtcagcatcgacgtggcgccgcgtaacaccgccgccgaaagtgtc
gatcagtcgatctatatggttgaaaagccccagcgcatggcgcttttgacccacctgatc
acgcatcatcagtggtcgcaggcgctggtctttacggctaccaaacacatggccaaccgg
gtcacccagcatctgcagaaggccggtatcacggcggcggccattcatggcaacaagagc
cagaatgcccgaactgccgcgctttccggcttcaagagcggggaagtgcaagtgatggtg
gccaccgatgtggcggcccgcggcattgatatctccgagctgcccaacgtggtcaacttc
gaactgcccaagacaccggccgactatgttcaccgtatcggtcgtaccggccgtgccggt
gccagcggtcaggccgtgtcactggtcatgcccgatgagcgtggccagctcaagcagatc
gaaaagctgatcggtcgcgccattccggtggccagcgccgaaggctttgacttcagccgc
gccgtgccggaaacgccggacgagcgcgaacagcgcccgggcggcggtcagcgtcgtcag
ggcagcggtcgcaataacggcggtggtgcgcgcagtggcggcggtgccggtcgcagcggc
ccaggcaatcgttcacgcagtggcggcaatggtggcagcggtgatgagcaggcccgtccg
gcacgtcgccgtcgtcgcagcggccctcgtacggccgacaacagcggcaaccgctga
DBGET
integrated database retrieval system
