Kushneria marisflavi: B9H00_12355
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Entry
B9H00_12355 CDS
T04840
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kma
Kushneria marisflavi
Pathway
kma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B9H00_12355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kma03400
]
B9H00_12355
Enzymes [BR:
kma01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B9H00_12355
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B9H00_12355
DNA repair and recombination proteins [BR:
kma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B9H00_12355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ART63746
UniProt:
A0A240URI8
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All DBs
Position
2701618..2702433
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AA seq
271 aa
AA seq
DB search
MPELPEVETTRRGIAPWVAGFEINEVIIRHHRLRIPVPEGLAELLAGERIGEIERRAKYL
LLPVAGGHLLWHLGMSGSLRLVEIGTEPRKHDHIDLVMSSGLVLRYHDPRRFGLVDFLKG
DPFSDRRLAALGPEPLDDGFSGDHLYERSRGKRVAVKNFIMDNATVVGVGNIYAAEALFM
AGIDPRVEAGLVERERYQRLAAAIKQVLAASIEQGGTTLRDFVSGRGEPGYFVQRLNVYG
RGGEPCRVCGHELRSMTIGQRASVFCPHCQH
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcctgaagtcgaaacgacccgccgcggtattgcaccgtgggtggcaggt
ttcgagattaatgaagtcatcattcgtcatcatcgcctgcgcattccggtcccggaaggc
ttggccgagcttttggccggtgagcgcatcggcgagatcgagcgccgtgccaagtatctg
cttctgccggtggccggtggacacctgctctggcatctcggtatgtccggcagtctgcgg
ctggtcgagatcggcaccgagccgcgcaagcatgatcacattgatctggtcatgagctcg
gggctggtgctgcgctaccacgacccacgtcgtttcggactggtggatttcctcaaaggt
gatccgttcagtgaccgtcgcctggccgcgctcggccccgagccacttgacgacggattc
agtggcgatcacctgtatgagcgctcgcgcggcaagcgcgtggcggtcaagaacttcatc
atggataacgccaccgtggtgggcgttggcaacatctacgctgccgaggcgctgtttatg
gctggcatcgacccgcgtgtcgaggccggcctagtcgagcgcgagcgttatcagcgtctg
gcagcggccatcaagcaggtactggcggcgtcgatcgagcagggcggtaccacgctgcgt
gatttcgtcagcgggcgcggcgaaccgggctatttcgtgcagcgactcaacgtctatgga
cgtggcggtgagccttgccgtgtctgcgggcatgagctgcgctcgatgaccattggccag
cgcgccagcgtgttctgccctcactgtcagcactag
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