Kushneria marisflavi: B9H00_13895
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Entry
B9H00_13895 CDS
T04840
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kma
Kushneria marisflavi
Pathway
kma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9H00_13895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kma03019
]
B9H00_13895
03400 DNA repair and recombination proteins [BR:
kma03400
]
B9H00_13895
Enzymes [BR:
kma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B9H00_13895
Messenger RNA biogenesis [BR:
kma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9H00_13895
DNA repair and recombination proteins [BR:
kma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B9H00_13895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ART64014
UniProt:
A0A240URA1
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All DBs
Position
3058629..3060743
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AA seq
704 aa
AA seq
DB search
MDKQQAEQLLKAALGDGAASFRPGQWEAIDALVNQRQKLLVVQRTGWGKSSVYFISTRIL
RDRGVGITIIISPLLALMRNQIESAQRLGIRAATINSTNSHEEESIKRALFAGQVDCLLI
SPERLSNDNFVRTVLMPVADHIGLLVIDEAHCISDWGHDFRPDYRRIVDILRQLPPGVPV
LGTTATANDRVIEDIRNQLGDILIQRGPLGRESLVLQSMTLPDQASRLAWLAQVIPSLPG
TGIVYTLTTRDAEEVAEWLQRNGVEASAYYSDVSPPQWLQANGLTDKNRYREYLENRLLR
NEIKVLVATGALGMGYDKPDLSFVIHYQAPGSIVAYYQQVGRAGRAIDSALGVLIAGHED
DDIHDYFRRSAFPSDQEIGTVLDTLDHFDGLSVPSIEQNANLRRSQIDKTLKILSVESPA
PVIKDGSVWRRTPVAYQPDHQRIRHLTEIRQQEWQQVNDYINTTGCLMNFLRRALDDPQS
EPCGRCANCLGQQLVPTHLDPQLTHQAATFQRHAEMPIKPRKQVAANAFQQYGFRGNLPP
SLQTQEGRVLSRWNDGGWGKRVKQEKHQGRFSDELIEAMAEMIVQRWQPQPQPGWVCAVP
SLNHPHLVPEFAWRLANRLGLRYVKAVYKIRHNEPQKAQQNRFHQCRNLDGVFEVTNELP
REAVLLVDDIVDSGWTMTVIAALLQRAGTGPVYPVALASSSVSD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggataaacaacaagccgaacagctactcaaggctgcacttggcgatggggctgcctca
tttcgcccgggtcagtgggaggccatagatgcactggtcaatcagcgccaaaaactgctg
gtggtgcagcgcactggctggggcaagagctcagtttatttcatcagtacgcggatactg
cgcgatcgtggcgtcggcatcaccatcatcatctcaccgttgctggcgctgatgcgcaac
cagatcgagtcggcccagcggctgggtattcgtgccgccaccatcaactcgacgaattct
catgaagaagagtccataaagagagcattgttcgctggtcaggtcgactgtttgctaatt
tctccggagcgtctatccaacgataactttgtacggaccgtgctgatgcccgttgccgat
catatcggcctgctggtaatcgatgaggcgcattgcatttccgattgggggcatgatttc
cgaccggactaccggcgcatcgtggatatacttcgacagcttccgcccggggtgccggtg
ctgggtactacggcaaccgccaatgatcgggtcattgaagatatccgcaatcaactgggg
gacatcctgattcaacgtggccctctgggccgtgagagcctagtgctgcagtcgatgacg
ctaccggaccaggcctctcgtctcgcttggctggcgcaggtgattcccagcttgccggga
accgggatcgtttacacgctaacgactcgcgatgctgaagaggtggctgagtggctgcag
cgtaatggcgtcgaggccagtgcttactattctgacgtcagtcctccgcagtggctacag
gcgaatggcctgaccgacaagaaccgctatcgcgagtacctggaaaaccggctgcttcgt
aatgagatcaaggtgctggttgccacgggggcactgggcatgggttatgacaagccggat
ctcagcttcgtcattcattaccaggcgcctggctccatcgtcgcttactaccagcaggtc
gggcgagcggggcgggccatcgattccgccttgggcgttctgatcgctggccatgaggat
gacgatatccacgattactttcggcgctcggcctttccttcggatcaagaaatcggcacg
gttctcgataccctcgaccacttcgacggtttgtcggtgccaagcattgagcaaaacgcc
aatctcaggcgtagtcagatcgacaaaaccttgaagatccttagtgtggagtcgcctgca
ccggtcatcaaggatggcagtgtatggcgacgcacgccggtcgcttatcagccggatcac
caacgcatccgccacctgacagagattcgccagcaggagtggcagcaggttaacgactac
atcaacaccacgggctgtttgatgaactttctacgccgtgcactggacgatcctcaaagt
gagccctgtggccggtgtgccaattgtttggggcagcagttggtgccaacccaccttgat
ccgcagttgacgcaccaggccgcgacctttcagcgccacgccgagatgcccatcaaacca
agaaagcaggttgccgccaatgcgttccagcagtatggctttcgcggcaacctaccccca
agcctacagacgcaggaggggcgcgtgctgtcgcgctggaacgatggtggatgggggaag
cgagtcaagcaggaaaagcatcagggccgattcagcgacgagctgatcgaggccatggcc
gaaatgatcgtgcagcgctggcagccgcagccccaacccggctgggtgtgtgccgtacct
tctctcaaccacccacatctggtgccggagttcgcctggcggctggctaatcggctaggg
ctgcgctacgtcaaagcggtttacaaaatcaggcacaatgagccccagaaggcccagcag
aaccgcttccaccagtgccgtaacttggatggcgtcttcgaggtaaccaacgagctaccg
agagaagccgtgctgctggtcgatgatatcgtggactcaggttggacgatgaccgtgatc
gccgcgctcctgcagcgtgccggtacggggcctgtctatcctgtggccctggcatccagc
tcggtgagtgattga
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