Koleobacter methoxysyntrophicus: H0A61_00063
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Entry
H0A61_00063 CDS
T07090
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kme
Koleobacter methoxysyntrophicus
Pathway
kme03420
Nucleotide excision repair
kme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H0A61_00063 (pcrA)
03430 Mismatch repair
H0A61_00063 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kme03400
]
H0A61_00063 (pcrA)
Enzymes [BR:
kme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H0A61_00063 (pcrA)
DNA repair and recombination proteins [BR:
kme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H0A61_00063 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
H0A61_00063 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QSQ07747
UniProt:
A0A8A0RJP8
LinkDB
All DBs
Position
complement(76368..78482)
Genome browser
AA seq
704 aa
AA seq
DB search
MDFLKDLNPAQREAVCHINGPLLILAGAGSGKTRVIAYRIAYLIEDVGVPPHNIMAITFT
NKAAGEMKERVDSLVSGKGMDIWVSTFHSACVRILRREIEKLGYNKNFAILDVQDQFSLI
RECLKELDINEKQFPERNVSSVIGSAKDRLLTPLDFEREAGGDFRKSKIAEIYKLYQKKL
KENNSLDFDDLIMKTVEIFTLFPDVLRFYQNRFLYIMVDEYQDTNFAQYKLVSLLAEKHR
NLCVVGDDDQSIYRWRGADIKNILEFERDYPDARVVKLEQNYRSTQIILDAANRVISNNF
NRKEKELWTQKGKGEKIKVFCASDEHHEARFIAGEIMNLAGGGYNFKDFAVLYRTNAQSR
VIEDIFMKMGLPYKIVGGLRFYERKEIKDITAYLRVISNPMDNISLLRIMNVPKRGIGMS
TRDKLADYSNREGLGLFQIIERPEEVPDLGSRAVKNLQEFYNLMGSLIGLKEKMVVSDLI
IEVLERTGYIKELEEENTAESRSRIENLKEFISVALEFQQGNPDQGLEEFLAHISLVTDI
DSMEEDENSVVLMTLHSAKGLEFPVVFISGMEEGIFPHSRSLLDEEELEEERRLCYVGIT
RARERLYLSHAWQRNLYGNITYNSPSRFLNEIPLNLVEKIGEGELGNEDYAVGFTPGEVV
VHERWGRGRVIDVRGTGLDQELSVDFGTYGIKHLLLRYAPIMRV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggattttctaaaggatttgaaccctgctcaaagggaagctgtctgccatataaacggc
ccccttttgattctggcaggtgccgggagcgggaagaccagggtgatagcctacaggata
gcatacctgatcgaagatgtcggggtgccgccccataatatcatggcgataacctttaca
aataaggctgcaggagaaatgaaagagagggttgatagcctggtttccgggaagggcatg
gatatatgggtcagtacctttcactcggcatgtgtcaggattttaaggagagaaatagaa
aaactcggttacaataagaattttgcaatcctcgatgtgcaggaccagttttctttaatc
agggaatgtttaaaggagcttgatataaatgaaaagcagtttccggaaaggaatgtcagc
tccgttatcgggagtgccaaggaccgccttttaacacctcttgattttgaaagggaagca
ggaggggatttcaggaaatctaaaatagcagagatttataaactatatcaaaaaaagctt
aaagaaaacaacagccttgattttgacgacctcataatgaagacggttgaaatatttacc
ctttttccggatgttctgagattttatcagaacaggtttctgtatataatggtggatgaa
taccaggatacgaattttgcacagtataagctggtaagccttctggccgaaaaacacagg
aatctgtgtgtggtaggggatgacgaccagagcatttatcggtggaggggggcagatata
aagaatatcctggagtttgaaagggattatccggatgctagggtggtaaagctggagcag
aattaccggtcaacccagattatactcgatgcggcaaaccgggttatatccaacaacttc
aacagaaaggaaaaagaactgtggacccaaaaggggaagggcgagaaaataaaggtgttt
tgtgcttccgatgaacaccatgaagccagatttattgccggagaaataatgaaccttgcg
ggcgggggatacaattttaaggactttgcagttctttaccggaccaatgcccagtcaagg
gttattgaagacatttttatgaaaatgggtttgccgtataagatagtaggcggtttgagg
ttctatgaaagaaaggagataaaggatataacagcatacctgagggttatttcaaatcct
atggacaatatcagccttttaaggataatgaatgtgcctaaaaggggtataggcatgtca
acccgtgataagctggcagattacagcaaccgagaagggctaggtcttttccaaataata
gaaagacctgaagaagtgccggatttaggttcaagggctgtaaaaaatctacaggagttc
tacaacctcatgggttccctgattgggctcaaagaaaaaatggtggtttcagacctcata
atagaggttctggagaggacgggctatattaaggaactggaggaggaaaatacagcggaa
tccagaagcaggatcgaaaacctgaaggagttcatttcagtggctcttgaatttcagcag
gggaatcccgaccagggtttggaggaattcctggcccatatttcccttgttacagatatc
gattccatggaagaggatgaaaattctgtggtcctcatgacccttcacagtgctaagggt
ctggagttccccgttgtttttataagcgggatggaagagggtatattcccgcattcccgt
tccctcctggatgaagaggagcttgaagaggaacggaggctgtgttatgtgggcataacc
agggcccgggaaaggttgtatttgtcccatgcgtggcagaggaacctttacgggaatatt
acctataattcgccgtcccgcttcctgaatgaaatacctttaaaccttgtggaaaaaatc
ggggaaggggaattagggaatgaagattatgctgtaggttttacccccggagaggtagtg
gttcacgaaagatggggcaggggaagggtaattgatgtaaggggtacgggccttgatcag
gaattatctgtggatttcggtacctatggtataaaacacctgcttttacggtatgctcct
attatgagggtatga
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