KEGG   Koleobacter methoxysyntrophicus: H0A61_00306
Entry
H0A61_00306       CDS       T07090                                 
Symbol
ygcB
Name
(GenBank) CRISPR-associated endonuclease/helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
kme  Koleobacter methoxysyntrophicus
Brite
KEGG Orthology (KO) [BR:kme00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:kme02048]
    H0A61_00306 (ygcB)
Enzymes [BR:kme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     H0A61_00306 (ygcB)
Prokaryotic defense system [BR:kme02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    H0A61_00306 (ygcB)
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Helicase_C Cas3_HD UvrD-helicase AAA_22 Potyvirid-P3 T2SSE
Other DBs
NCBI-ProteinID: QSQ07987
UniProt: A0A8A0RKG5
LinkDB
Position
complement(315776..318013)
AA seq 745 aa
MKMIFYAKPDQSYREHVEAVYHAWKEVVKYKKKLICRLASIFSFTEEDFLQGSLLTVVLH
DIGKMIEPFQSIMEAKKHNKKVDYRKNYRHELASIAFILAALNKINENRDITFPFELFAV
ASHHRRLDTDLTAFEREKLSKLPNFCKNGIKEALQTAEEIFSLENYPFPELDEERLINVN
GLKYLIKTISLLPKFIQRENPRKIRVVYSLMKGILHYADWYGSAGISVDYSVENTPEDII
SNIKTRCMEKGIIFNGLREFQKSVGSYRGNLIVIAPTGSGKTEASLLWALNNSKDLGSSK
IIYLLPTMATANSMWLRLAEIFGSERVGLTHSSSNLMFREEEEKMEFEKEVTSTRNMLFD
RAFIRPVTVATIDQLLNTGFNSEHWAVKEINAANAVIIMDEIHAYDGWTMGLIFSSIKHY
AELGARFLLMSASMPCYLIDLLKECLDDAAVIKDTELLNEQRSTYWVKPYFIDEAYNEIE
QAVLSEHKVLVVVNTVDKCQQLTEKFKVFNPVCLHSRFILKDRKEIEKNIDNARFVIATQ
IVEVSLDIDFDWLFTECAPPDAIVQRAGRVNRYRDPKRDSRVIIYKAGHKSERIYNPLND
KELLERTFRTFNKSPRNMKEKDLLDVIEEVYDDYDIRLSEAFQQARDQFHVCQKNRLCIL
DNRLTEDELEKTRLSRYETISVIPLCFYNEVKSLPAGERKWYEVKIPYWFARKYARMEDG
LLFCDLKYDRNLGAFLKEDQGPLFL
NT seq 2238 nt   +upstreamnt  +downstreamnt
atgaagatgatattttacgcaaaaccggatcaatcctatagagagcatgtagaggcggtc
taccatgcatggaaagaagttgtgaaatataagaaaaaactaatttgtaggcttgcctct
atcttttcttttacagaagaagattttcttcaggggtcattacttacggtagttttacac
gatatcggcaaaatgatagagccttttcaaagtattatggaagcgaaaaaacataataaa
aaggttgactatcgaaaaaactacagacatgaactggcatctatcgcatttatcctcgca
gctcttaataaaattaatgagaacagggatattacctttccttttgaattgtttgctgta
gcaagtcatcacaggagactggatacagatttaactgctttcgagagagaaaaattatca
aaacttccgaatttctgtaaaaatggaattaaagaagccttacagactgccgaagaaata
ttttctcttgaaaattacccctttccagagttggatgaggagaggcttataaatgtaaat
ggcttaaaatacttgattaaaactataagtttgcttcctaaatttatccaaagagaaaac
ccgcggaaaattagagtggtatacagccttatgaagggaattttacattatgccgattgg
tacggttctgcaggtatatcggtagattatagtgtagaaaacacaccggaagatattata
agtaacataaaaactagatgcatggaaaaaggtattatatttaatggccttagggaattc
caaaaatcggtaggttcttacagagggaatctgattgttattgccccaactggaagcggc
aaaactgaagcctctttgttgtgggcattgaacaattcaaaggatttaggtagttcaaag
attatctatctgctgcctactatggcaactgccaatagtatgtggttgaggttagcagag
atttttgggagtgaacgagttggcctaacccattcttcttctaatttaatgtttcgtgag
gaagaagaaaaaatggagttcgaaaaagaggtcacatccacgagaaatatgcttttcgac
agggcctttataagacctgtaactgtagcgacgatagaccagttattaaacacaggtttt
aattccgagcactgggctgtaaaggaaataaatgctgccaatgcggtaataataatggat
gaaatccacgcttatgatggttggacgatggggctgatattttcatctattaagcattat
gcagaattaggtgcccgctttttgttaatgagtgcatcaatgccatgctatttaatagac
ttgctgaaggaatgtctagacgatgcggctgtaatcaaagatacagaacttctgaatgaa
caaagaagcacatattgggtgaaaccctatttcattgacgaggcatataatgaaattgag
caagcagttctgtccgagcataaagtgctggtagtcgttaatacagtagacaagtgtcag
cagcttacagagaaattcaaggtttttaaccctgtttgtttacactcaaggtttatttta
aaggacaggaaagagatagaaaaaaacatagataatgctaggtttgtaatagctacgcaa
atcgttgaggtttccctggatattgattttgattggctctttacggaatgcgctccaccc
gatgccattgtgcagcgggccggccgagtaaacagatatagagaccccaaaagggatagt
cgtgtaataatttataaagcggggcacaaatccgagagaatttacaatcctttaaatgat
aaagaactgcttgaaaggacatttcgaacgtttaacaaaagcccccggaacatgaaggaa
aaagacctgttagatgtcatcgaggaggtatatgatgattatgatataaggctttcagaa
gcctttcagcaggcacgagatcaatttcatgtttgtcaaaaaaatcgactttgcattctt
gataaccgcctgacagaagatgagcttgaaaaaacacgcctttccagatatgaaaccata
tcagtcataccgttatgcttctataatgaagtaaaatcactgcctgcaggagaacgtaaa
tggtatgaagttaagattccttactggtttgccagaaaatatgcgagaatggaggatggc
ttgttattctgtgatttaaaatatgataggaacctaggagcgtttttaaaagaggatcaa
ggtcctttgtttctataa

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