Koleobacter methoxysyntrophicus: H0A61_00765
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Entry
H0A61_00765 CDS
T07090
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kme
Koleobacter methoxysyntrophicus
Pathway
kme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H0A61_00765 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kme03021
]
H0A61_00765 (rho)
03019 Messenger RNA biogenesis [BR:
kme03019
]
H0A61_00765 (rho)
Transcription machinery [BR:
kme03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
H0A61_00765 (rho)
Messenger RNA biogenesis [BR:
kme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H0A61_00765 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
AAA
NACHT
ATPase_2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QSQ08443
UniProt:
A0A8A0RJP7
LinkDB
All DBs
Position
complement(814619..815872)
Genome browser
AA seq
417 aa
AA seq
DB search
MDISELEKNTISELHQIAKELGIPGYYKYRKKELIFKILESQTEKDGLMFSQGVLEILPE
GYGFLRIDNYLPSPEDIYISQTQIRRFNLRTGDMVSGKIRPPKDNEKYKALLHVQAVNGL
DPEHALSRYHFDSLTPIYPNERLTLETTPERTSTRIIDLIAPIGKGQRGLIVAPPKAGKT
VLLKEIANSIETNYPDIDLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPPENHIKVADM
VLERAQRLVESGKDVVILLDSITRLARANNLVVPPTGRTLSGGLDPSSLHKPKRFFGAAR
NIEEGGSLTILATALIDTGSRMDEVIYEEFKGTGNMELHLDRKLAERRVFPAIDIKRSGT
RKEELLYTPNELEAVWALRKTLHSLGTVEAVETFIEKVSKAKNNIEFITSILKHNFE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggacatatcggaacttgaaaaaaataccatttcagaacttcatcagattgcgaaggaa
ttaggtattcccggttattataaatacaggaaaaaggaactcatatttaaaatcctggaa
agccagacggaaaaagacgggctgatgttttcgcaaggggttttagaaatccttcctgaa
ggttacgggtttttgcggatagataattatcttccgagccctgaagatatctatatatcc
cagacccagataaggagatttaatctacgcacaggggatatggtttcagggaagatccgc
ccccccaaggataatgagaaatacaaagccctcctacatgttcaggctgtcaatggcctg
gacccggaacatgctttatcgagataccatttcgattccctgacacctatctatcccaat
gaaaggctcacccttgagactaccccagaaaggacttcaacccgaataatcgatttaata
gcccctatcggtaaaggtcagcggggcctgattgttgctccgcctaaagccggcaaaacg
gtgcttttaaaagaaatagctaacagcattgagactaattaccccgatatagaccttatc
gtcctattgatagatgaaaggcccgaagaagtaactgatatgcagcgttcggtaaagggt
gaagtcgtcagctccactttcgatgaaccccccgaaaatcatatcaaggtagcggatatg
gtcctcgaaagggcgcagagattggtagaatcgggaaaagatgtggttatcctccttgac
agcataacccgccttgcccgcgcaaacaatctggttgttccccccacgggcagaaccctt
tccggtggccttgaccccagttctctgcataaaccgaagcggtttttcggtgcagcaaga
aatattgaagaaggagggagcctgaccattctggctactgcccttatagatacaggcagc
aggatggatgaagtaatatacgaagaatttaagggaacgggcaatatggaacttcacctg
gacaggaaattggctgaaagaagggttttccctgccattgatatcaaacgttccggaacc
cgcaaagaagagctcctttatacccccaatgaacttgaagcagtatgggccctcagaaaa
accttacattccctgggaactgttgaagctgttgaaaccttcatagagaaggtttccaag
gctaaaaacaatatcgaattcataacgtccattttaaaacataactttgaataa
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