Koleobacter methoxysyntrophicus: H0A61_00805
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Entry
H0A61_00805 CDS
T07090
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
kme
Koleobacter methoxysyntrophicus
Brite
KEGG Orthology (KO) [BR:
kme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kme03032
]
H0A61_00805 (hup)
03036 Chromosome and associated proteins [BR:
kme03036
]
H0A61_00805 (hup)
03400 DNA repair and recombination proteins [BR:
kme03400
]
H0A61_00805 (hup)
DNA replication proteins [BR:
kme03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H0A61_00805 (hup)
Chromosome and associated proteins [BR:
kme03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
H0A61_00805 (hup)
DNA repair and recombination proteins [BR:
kme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
H0A61_00805 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
VWA_3
Motif
Other DBs
NCBI-ProteinID:
QSQ08480
UniProt:
A0A8A0RLI7
LinkDB
All DBs
Position
complement(855056..855331)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIASIAEKSGLTKKDSEKALNAFIESVEEALVKGDKVQLVGFGTFEVRERSARKG
RNPQTGDEIDIPAASVPAFKAGKALKDKVNY
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaatctgaactcattgctagtattgctgaaaaaagcggattaaccaaaaaggat
tccgaaaaagcccttaatgcctttatcgaaagtgttgaagaggcattggtgaaaggggac
aaggtacagctggtaggcttcggaacctttgaagtaagggagaggagcgcaagaaagggc
aggaacccgcaaactggtgatgaaatcgacattcctgccgcaagtgttcctgcatttaaa
gcaggaaaggccttaaaagataaggtcaactactaa
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