Koleobacter methoxysyntrophicus: H0A61_01785
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Entry
H0A61_01785 CDS
T07090
Symbol
recD2_1
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kme
Koleobacter methoxysyntrophicus
Pathway
kme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H0A61_01785 (recD2_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kme03400
]
H0A61_01785 (recD2_1)
Enzymes [BR:
kme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H0A61_01785 (recD2_1)
DNA repair and recombination proteins [BR:
kme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H0A61_01785 (recD2_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
nSTAND3
Helicase_RecD
PIF1
PhoH
UvrD-helicase
AAA_22
HHH_2
DEAD
NPHP3_N
HHH
NTPase_1
ATPase_2
SLFN-g3_helicase
TrwB_AAD_bind
Ribosomal_S13
AAA
T2SSE
SRP54
ABC_tran
DNA_pol_lambd_f
TsaE
AAA_28
ResIII
AAA_16
KAP_NTPase
AAA_7
AAA_24
MobB
DUF815
MeaB
Rad17
AAA_14
TraI_hel_assoc_N
KTI12
cobW
5_3_exonuc
NACHT
Pribosyltran
Thymidylate_kin
AAA_5
UvrD_C
Herpes_Helicase
CbiA
Flavi_DEAD
AAA_29
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
QSQ09422
UniProt:
A0A8A0RNF8
LinkDB
All DBs
Position
1867728..1869923
Genome browser
AA seq
731 aa
AA seq
DB search
MYEIEGIVERITYFNEETNYTVAKIQRKNTDYLTTIVGNFPVLNIGETLRLKGRWVNHSD
YGTQFMVESYEITVPATLNGIEKYLGSGLIKGIGPKTAKKIVGHFGLDTLNIIQYNPERL
TEIEGIGEKKVRDIVKAFEEQKDIQEVMMFLQANGVSPTYAVKIYKEYKDKTIEYIKENP
YRLADDIFGIGFKTADKIAQKLGIEPTSKYRVSSGIKYVLSQFSNDGHTYVPLDDLINKG
CEILEVTPGLIEEALSGLVKKEMVFVQEFDSPKGSKGIYLAPFYYAEKGISERICKLASL
PAKELKVDIEKEIRAIERESGVKLGKGQREALEKLKDNNVLVITGGPGTGKTTTIKSIIR
LLEKQNMKVVLAAPTGRAAKRMTETSGREAKTIHRLLEYSFVQGEGMHFQKNEDKPLDAD
AVIVDEVSMVDLILMYNLMKAVKYGTRLILVGDVDQLPSVGAGNVLKDIIESGAVEVVHL
KEIFRQARESMIVVNAHRINRGEFPILNVRGKDFFFEKKDDPQEIMETIIQLCSYRLPKF
KGYNPIDDIQVLTPMRRTPIGVNVLNDELQKVLNPPSHKKEERRFGGTVFREGDKVMQIK
NNYTKEVFNGDIGRIVRIDNEEGEILVRFPDVGADRDVVYEVHELEELVLSYAVSVHKSQ
GSEYPVVVMPVSTQHYLMLQRNLLYTAVTRAKEMVVLVGTKKALAIAVKNNKVAERYSYL
AQRIREAFTSF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaatagagggaatcgtggaaaggattacatattttaatgaggagacaaattat
accgttgcaaaaatacagaggaaaaatacggactatctcaccacaattgtgggtaatttc
cctgtgttgaatataggggaaaccttaaggttaaaaggcagatgggtaaaccattccgat
tatggcacccaattcatggtcgagtcttatgaaataacggtgcctgcaaccctgaacggt
atagaaaagtatctgggttcgggtctgattaaaggaatagggccaaagactgctaaaaaa
atagtggggcattttggtctggataccctgaatataatccagtacaacccggaaaggctg
acggaaatcgaaggtataggtgagaaaaaggtcagggacatagtgaaggcctttgaagaa
caaaaggatattcaggaagtgatgatgttcttacaggcgaatggtgtaagccctacatat
gccgttaagatctacaaggagtacaaagataaaaccatagaatatataaaagaaaaccct
taccgccttgccgacgacatattcgggatagggtttaaaaccgctgataagatcgctcag
aagctgggtatagaacctacttcgaaataccgggtttcttcaggaattaagtatgttctg
agccagttttccaatgatggccacacttatgtgccgcttgatgatttgataaataaagga
tgtgaaatcctggaggttactcccgggttgatagaggaagccctcagcggcctcgtaaaa
aaagaaatggtttttgtacaggaattcgattcccctaaagggagtaaaggaatataccta
gcccctttctattatgcggaaaagggaatcagtgagaggatctgcaagctggcaagtctg
ccggctaaagaactgaaggttgatatagagaaagaaataagggctatagagagagaatca
ggggtaaagctgggaaaagggcagagggaggccctggagaaattaaaggataataatgtc
ctggtcataacaggaggaccgggtacggggaaaactacaacaataaagagcattataagg
cttttagaaaaacagaacatgaaggttgtactggcggctcccacaggaagagccgctaag
agaatgactgaaacttccggcagggaagccaaaaccatacaccgacttttagaatattcc
tttgtacagggagaaggaatgcattttcagaagaatgaggataaaccccttgatgctgat
gccgttatagtggacgaggtttctatggttgacctcattcttatgtataacctcatgaaa
gcggtaaagtacggcaccaggctgatacttgtgggggacgtggaccagttaccttctgtc
ggcgcgggtaatgtgctgaaggatattatagaaagcggtgctgttgaagtagtccattta
aaggaaatttttagacaggccagagaaagcatgatagtggtaaatgcccacaggataaat
agaggggaatttccaatccttaatgtaaggggtaaggatttcttttttgaaaaaaaggat
gacccccaggagataatggaaactataattcaactgtgttcataccggttacccaaattt
aagggttataaccctatagacgatatacaggtgttgacaccaatgcggcggacccctatc
ggggttaatgtattaaacgatgaactccaaaaggtccttaaccccccttcacacaaaaag
gaggaaagaaggttcggagggacggtattcagggaaggggataaggtaatgcagataaaa
aacaactacacgaaagaggttttcaacggagatatagggaggatagtaagaattgacaat
gaagaaggggaaatactggtgaggtttcccgatgtgggcgctgacagggatgtagtttat
gaagttcacgaactggaggaactggttctttcttatgctgtatccgtccacaaaagccag
ggcagtgaataccctgtggtggtcatgcccgtttctacccagcattaccttatgctccag
cgcaatctgctgtacacggcagtaaccagggcaaaggaaatggttgttctggtcgggacc
aaaaaagcccttgccatagcggttaaaaacaataaagttgctgaaaggtattcatatctt
gcccagagaataagggaggcttttaccagtttttaa
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