Koleobacter methoxysyntrophicus: H0A61_01825
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Entry
H0A61_01825 CDS
T07090
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
kme
Koleobacter methoxysyntrophicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
RuBisCO_activase_AAA_helical
Cas3-like_C_2
RDD1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QSQ09462
UniProt:
A0A8A0RNJ4
LinkDB
All DBs
Position
1910403..1913660
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AA seq
1085 aa
AA seq
DB search
MEVINNIGKTLGDDLKKNIGKKARLSIAASCFSIYAYEALKKELAQIEELRFIFTSPTFI
TDKLKKEKREFYIPKLNREKSLYGTEFEIRLKNELTLKAIAKECSQWIKQKVTFKSNNTS
CTLQGFINVENGTEKVTYMPVNAFTTVDLGYEKGNALSNMVNKFTDYPISKHYFDLFEQV
WQDEEKLTDVTDQVIEHISTVYKENSPEFIYFLILYNIFNEFLEDISQDLLPNEATGFKE
TEIWKRLYHFQKDAVIGGINKLEKYNGCILADSVGLGKTFTALGIIKYYELRNKSALVLC
PKKLGENWLTFRQNVTNNILYRDRFRYDVLYHTDLSRESGYSNGIPLDRINWGNYDLLVI
DESHNFRNNEARKEKETRYQKLIRKVIQAGVKTKVLMLSATPVNNRFNDLKNQLALAYEG
DPKNINSALNTEKGVEEIFRRAQTAFNSWSKLPMVMRTTETLLEMLDFDFFELLDSVTIA
RSRKHIQKYYDTKEIGPFPKRLKPLSYYCDLTKRQDVIDYNEIFRELSRLTLALYAPFNY
ILPSRIRFYEEQYDTVVRSGGSLKQLDRERSLQVLMRINLLKRLESSVEAFRITLTKMLE
KINETIDLIDSYNETATSQTFGHTEFDAVNLDDDDWLDENYNIGDNIRINLSDMDRLRWR
EDLERDRKVFANLLEEMKKITPEHDEKLATLKEVIAHKINNPINPGNKKILIFTAFADTA
AYLYKYISPYVKDAFGLESAKVVGSDENKTTIKIKNDLHTILTCFSPRSKEKHLTMPDLK
GELDVLIATDCISEGQNLQDCDYLINYDIHWNPVRIVQRFGRIDRIGSRNTVIQLVNFWP
NMTLDDYIRLKERVENRMVIMDMTATGEDNVLSNRSSDLEYRKEQLKKLQEEAIDFDEIN
SGVSITDLGLNDFRMDLVQYVKEEGDLSKVPPGLHAVVPVDMEKGAPPGVIFVLRNVNSE
VNINNQNRLHPFYLVYIGSDGQVVANHLEVKKTLDLLRLLCKGRREPVAEVYKPFNRETR
DGRKMDRYSHLLEEAIKSIIDVKEESDLDSLFSAGGTTALLDTVRGLEDFELIAFVVVRE
KDARV
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
gtggaagtcatcaataacatcggcaaaacattgggtgatgacctaaaaaaaaacatcggc
aaaaaggctaggctttccattgccgcctcttgtttctctatttatgcttacgaagccctt
aaaaaagagctggcacaaatagaagagctgcgctttatttttacctcccctacctttatt
actgacaagctcaaaaaagagaaacgagaattttatatccccaagctcaacagggaaaaa
agcctctacggtacagaatttgaaatccggctaaaaaacgagctgacgctaaaggccatt
gccaaagagtgcagccagtggataaaacaaaaggtaactttcaagtccaataataccagc
tgtactctgcagggttttatcaacgtggaaaacggcacggaaaaagtgacctatatgcct
gtaaatgcctttacaactgtggatctaggctatgaaaaaggcaatgctctttctaatatg
gttaataaatttacagattatcctataagcaagcattattttgatctgtttgaacaggta
tggcaggacgaagagaaacttaccgatgtgacggaccaggtaattgagcatatatcaact
gtttacaaagaaaattcgcctgaatttatttactttctaattctttacaacatttttaat
gaattccttgaagacatatcccaggatctgcttcctaatgaggccacaggatttaaggaa
accgaaatatggaaacggctctatcattttcaaaaagatgcggtcattggcggtattaac
aagctggaaaaatacaacggctgcatcctggccgacagcgtaggcctgggtaaaaccttt
actgccctagggatcatcaagtattacgaactgcgcaacaaatctgccctggtactctgt
cccaagaagttgggagaaaactggcttaccttccggcaaaatgtcaccaacaacatttta
taccgcgaccggttccgttacgatgtgctgtatcacaccgacctatcccgggaaagcggt
tattccaacggtatccccttagatcgaatcaactggggcaattacgatcttctggttatc
gacgagtctcacaattttaggaacaacgaagccagaaaagaaaaggagacccgctaccag
aagctgatacgcaaggtaattcaggctggcgttaaaaccaaagttctcatgctctcggcc
actccggtcaacaaccgtttcaatgacttaaagaaccagctggccttggcctacgagggt
gatccgaaaaatatcaattccgcccttaataccgaaaaaggtgtagaagaaatattccgc
cgggcccagacggcatttaacagctggtccaagttgcctatggtcatgagaactactgaa
accctgctggaaatgctggactttgacttttttgaactattggacagcgttaccattgcc
cgttctagaaaacatatccagaaatactacgatacaaaagaaatcggtcccttcccaaag
cgtttaaaacccctttcttattactgcgatctcactaagcggcaggacgtgatagactac
aacgagatatttagagaactttcccgcctaaccctggccctttatgcgccttttaattac
atattacccagcaggataagattttacgaagaacagtacgatactgtggtcagaagtggg
ggaagcttgaagcagttggaccgggagagaagcctgcaagtcctgatgcggatcaatctg
ctcaaaaggctggaaagctccgtagaagctttccggatcacccttaccaagatgctggaa
aagattaatgaaaccatagaccttatagatagctataacgaaactgctacttcccagacc
tttggccatactgaatttgatgccgtgaacctggacgatgatgactggctggacgagaat
tacaacataggcgacaatatcaggattaacctctctgatatggacaggctccgctggcgg
gaagacttggagcgggaccgtaaagtttttgccaatttactggaagagatgaagaagatc
acaccggaacacgatgagaagctggctactctcaaagaagtgattgctcataaaataaac
aaccccattaatccgggtaacaagaaaatattaattttcacggcctttgcggatacggct
gcctacctttataagtacatttctccctatgtaaaagacgcattcggactggaaagtgcc
aaagtagtgggcagcgatgaaaacaaaactactatcaagataaaaaatgacttgcatact
atactgacttgcttttctccccggtcaaaggaaaagcatcttaccatgccggaccttaaa
ggagagttggatgttctaattgccaccgactgtatctccgagggtcaaaacctgcaggac
tgtgattacttgatcaattatgatatacactggaaccctgtcaggattgtccagcgtttc
gggcgcatcgacagaataggctcccggaacaccgttattcagctggtaaacttctggccc
aatatgactttggacgattatattaggcttaaagaaagggtagaaaacaggatggttatc
atggatatgaccgctaccggggaggacaatgtcctttccaaccggtccagtgacctggag
tacagaaaagagcagctcaagaagctccaggaagaagccattgactttgatgagataaat
tccggtgtttctattaccgaccttgggttaaatgattttcgtatggacctggttcagtat
gtaaaagaagaaggcgacctgagtaaggttcctcccggcctgcatgctgttgtacctgtc
gatatggaaaagggtgctcctcccggtgttatcttcgtcctgcgcaatgttaacagcgaa
gtaaacataaacaaccaaaacaggctacatcccttttacctggtctatattggcagcgac
gggcaggttgttgccaaccacttggaggtaaaaaagaccctggatttattaaggttattg
tgcaaggggcgcagggagcctgtagcggaagtctataaaccttttaaccgggagaccagg
gacggccgcaaaatggacaggtattcccacctcctggaagaggccataaagtctattatc
gatgtcaaagaagaaagcgacttggacagccttttcagtgccggcggcaccacggctctt
ctggatactgtgcggggcctggaagactttgaactgattgccttcgtggtggtgagggag
aaggatgcccgtgtttaa
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