Koleobacter methoxysyntrophicus: H0A61_02049
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Entry
H0A61_02049 CDS
T07090
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
kme
Koleobacter methoxysyntrophicus
Brite
KEGG Orthology (KO) [BR:
kme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kme03400
]
H0A61_02049 (addB)
Enzymes [BR:
kme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H0A61_02049 (addB)
DNA repair and recombination proteins [BR:
kme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H0A61_02049 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
QSQ09670
UniProt:
A0A8A0RQ14
LinkDB
All DBs
Position
2125012..2128485
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AA seq
1157 aa
AA seq
DB search
MTLRFILGRAGTGKTRFCLEEIVNKLKVSPEGEALILLVPEQATFQTERALLSASELKGI
MRAEVLSFQRLAYRVLQEVGGMARIYIDELGKKMILRRFLERRKDKLRVFHWIARQPGFI
DHLADVLKEFKNYRIPCEKLKAAADKLETDAERDILTDKLCDLTILYSDVQDFLADKHLD
RDNYLDLLAEKINEWSYLEGAEVWVDGFTGFTPQELVVLERIMKRVNRFSITLCLDTEDL
KLEIDDSYLFYTTRDTMRKLSDTAKRIGVEEEEPVLLDSGAPYRFIESAAISHLEREFFN
RPVKTFKDDQDDIRVYAASNRRAEIEGVAREIIRLCRDEGYRFKEISVVMRELEPYSQLI
SSIFTDNNIPHFIDEKRHIMHHPLVELIRSALEVVIQNWSYEPVFRYLKTDLADVEREQV
DLLENYVLAHGIRGAKWVDGKPWTFRRKYTLGEEEEVTSKIEKELEEINGAKQKAVKQLA
DFYMTIKKQTRVKDYTAALFKLLVDLKIKEKLEKWGDEARAFGKLDLALEHVQIWDNIID
LMEQVVEGLGDEELTVEQYAQIIDSGLKSIKIGLVPLGLDQVFVGNLDRSRNPDVKVSFI
LGVNDGVLPLRLKDCGMFTDTERQHLKEMGIELAPDSRRRLFDEQYHIYVAITRASNKLY
LSYPLADDEGKALMPSFVIRRIKRLFPGIEEKTWGIEPDGSDRDLEYITSPYNCLIYLPT
QLRETMEGNRINPIWWDVYSWFISRDTAACQKTLQGLFYSNQETDIPRQLTRKLFGSPVK
ASVSQLERFQRCPFSHFLSHGLRLKERGIYRLTSPDLGQFFHAALDMFAKKIKQESLDWG
ELTKEQCINLAAEIVDDLAPKLQNEILMSTSRYRYMVRKLKKTVERAVLILREHSQKGSF
RPVGIELTFGKGGILPPLVIELDGDGDYIELEGRIDRVDAAQLDDKVYLRVVDYKSGNDT
FELQDIYYGLSLQLLIYLEVILTYAPFLVSCEGKPGGMLYFKVDNPIISGSGPASPEKIE
REIIKKLKMNGLVLADSDVVNLMDGQISGYSDIIPVALKKDGGFYSGSSIATEEQFTALR
QHLKQVIKGVGQGILAGNVKIEPYLKGHLKPCNYCRYKAVCQFDVLLSENTYRVLKKINR
ELIWDLLDGQRGEEEHG
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgactctgcgatttatattgggcagggccggcaccggcaaaacccgtttttgtcttgaa
gaaatcgtgaataagctgaaagtatctccagaaggtgaagctttaatattattagtccct
gaacaggccacctttcagacagaaagggcccttttatctgcttcagaacttaaaggtata
atgagggctgaggtattgagctttcaacgtctggcatatagggtccttcaggaggtagga
ggaatggccagaatatatatcgatgaattggggaaaaaaatgatcctgcggcggttcctt
gagagacgtaaagataaactcagggttttccactggatagcccggcagccggggtttatt
gatcacctggctgatgttttaaaagaatttaagaattaccggattccctgtgaaaaacta
aaggctgccgctgataaacttgaaaccgatgcagaaagagatattttaaccgataaactc
tgcgatctaaccatcctgtacagtgatgttcaagatttccttgctgacaaacatctggac
agggacaattatcttgatttactggccgaaaagataaacgaatggtcctacttagaaggg
gccgaggtatgggttgacggttttacgggctttacaccccaggagcttgttgtattagaa
aggatcatgaaaagggttaataggtttagtattacattgtgccttgataccgaagattta
aagctggaaattgatgattcgtaccttttttatacaaccagggatacgatgagaaagtta
tccgatacggctaaaagaatcggggtcgaggaagaagaacctgtattgctggattccggg
gccccttaccggtttattgaaagtgcggcgattagccaccttgaaagggagttctttaac
cggcctgtcaaaacctttaaagacgatcaggatgatataagggtctatgctgcatccaac
cggagggccgaaatagaaggggttgcccgtgaaattatcaggctctgcagggatgagggg
taccggtttaaggagatctctgttgttatgagagaactggaaccctacagccagttgatt
tcctctatatttaccgataacaatatacctcactttatcgatgagaagaggcatataatg
catcaccctctggtagaacttattcggtctgccctggaagttgtaattcaaaactggtca
tatgaacccgtgtttagatatttgaaaaccgatttggctgatgtagaaagggaacaggtg
gacctgctggagaactacgtactggctcacggtataaggggggcaaaatgggttgatgga
aaaccgtggacctttcgcaggaaatatacattgggtgaagaagaggaagtgacctcgaag
atagaaaaagaactggaagaaataaatggggctaaacagaaggcagtaaaacagttagca
gatttctatatgactattaaaaaacagacacgggttaaggattatactgcagcccttttt
aaacttttagttgatttgaaaataaaagagaagctggaaaaatggggagacgaagccagg
gctttcggtaagcttgatctggctctagaacacgtacaaatttgggataacatcattgac
ctgatggaacaggtagttgaagggttaggagatgaagagctaaccgttgaacaatatgcc
cagataatagattccggattaaaaagcataaaaatcggccttgttcccctcggtctggat
caggtttttgtaggcaatctggaccgttcaagaaatccggatgtaaaggtctcatttatc
ctgggtgtgaatgatggggtcttacccttgagattgaaggattgcgggatgtttaccgat
actgaaagacagcatctaaaagaaatgggtattgaactagccccggacagcagaagaagg
cttttcgacgaacagtaccatatatatgtggctattacaagggcttcaaataagctctac
ctgagctatcccctggctgatgatgagggaaaggcgctaatgccgtcttttgtaataaga
aggataaagaggttatttccggggattgaagaaaagacgtggggtattgaacctgatggc
agtgatagggacctcgagtatattacaagtccatacaattgccttatatacttacctacc
cagctgagggaaaccatggaaggaaaccggatcaaccccatctggtgggatgtatattcc
tggtttatatccagggatacagcagcgtgtcaaaagactcttcagggattattttattca
aatcaggaaaccgatattcccaggcagcttacacgaaaactgttcggcagccctgtaaag
gccagtgtctcccagttagaaaggtttcagaggtgtcccttttcccattttctttcccat
ggattgcgccttaaagagaggggcatatacagattgacgagccctgatctggggcagttt
ttccatgcggctctggatatgttcgccaaaaagataaagcaggagtccctagactgggga
gaattaactaaagaacagtgcattaacctggctgcagagatagttgatgacctggctccc
aagctgcagaatgagatattgatgagcacatcccgatacaggtatatggtaaggaaatta
aaaaagacggtggaaagggctgttcttatattaagggaacattctcaaaaggggagtttt
cgccctgttggcattgaattgacttttggaaaaggcggtattcttccgcctctggttatc
gaattggacggtgatggggattatatcgagctggaaggcagaattgatagggttgatgca
gctcaattagatgataaggtatacttaagggtagtggattacaaatcgggaaacgatacc
tttgaactccaggatatatattacgggttgagccttcagcttctaatatatctggaggta
atccttacatatgcaccttttttggtaagttgtgaagggaagcccggagggatgctgtat
tttaaggtagacaatccgataatttccggttcgggtccagcttcccctgaaaaaatagaa
cgggagattataaaaaagttaaagatgaacggccttgtactggctgacagcgatgttgtc
aacttgatggacggtcaaatatccggttattcggatatcatccctgttgctttaaaaaaa
gatggcggattctacagcggttcttctattgctaccgaagaacagtttacagccctccgt
cagcacttgaaacaggttattaaaggggtcggacaggggattttagccgggaacgttaaa
atagaaccttatctaaaggggcatttaaaaccgtgcaattactgcagatacaaggccgtc
tgccagtttgacgtattattatccgaaaatacatatagggtgctgaaaaaaataaaccgc
gagctgatatgggaccttctggacgggcaaaggggggaagaggagcatggttaa
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