Koleobacter methoxysyntrophicus: H0A61_02052
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Entry
H0A61_02052 CDS
T07090
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
kme
Koleobacter methoxysyntrophicus
Brite
KEGG Orthology (KO) [BR:
kme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kme03400
]
H0A61_02052 (sbcC)
DNA repair and recombination proteins [BR:
kme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H0A61_02052 (sbcC)
Archaeal homologous recombinant proteins
H0A61_02052 (sbcC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
Crescentin
ABC_tran
DUF87
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QSQ09673
UniProt:
A0A8A0RN37
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All DBs
Position
2133509..2137123
Genome browser
AA seq
1204 aa
AA seq
DB search
MKPIKLKIAGLHSFREPQVIDFDRLCETGVFGIFGPTGSGKSTILDAITLALYGKVERAP
HNTQGILNHAEDGLMVEFVFELGNRNLRNRYMVQRGFVRGEGVQLKSSACRLVQFIDGRE
LVLADRPSEITGQVEKLLGLNVDDFTRAVVLPQGKFSEFLSLKGKERRQMLERLFNLEQY
GDLLNQRLSQRLNSVSGELQGIIGEQKGLGDASEEAVKMAEKKFLEARAMEIKSAEFLKK
VEEEYEKQRQLWEWQQELAEVIKARRQLDLIKDEIALKAGKLDAALRAEGIRPYLNEVKE
AEDSLMKAKKDLDQAVIELERSKEKVSKTLDSFEKVSQKRNRDEPLLIETLAKLEQAKNY
EEELIKLRGIIKGLQEEYERVNNSRKVIESRLEEICRQRDKDEESMKNLKEKLDRFTVTP
EYRLQIGEAFNAKQSYLSAEKLTRNLEEDLKTKIKELEQIQNLKNKIQEEVRNLEEKLEN
LKVRLSEMQANKPGDEGSLAARMKEIALLRSSVEEMARCEKELDFELTAQNKKEKELREA
KEEYELIEKDYNRVKALCEETGVKVKQLEGDLKEFEQQNLASRLAETLYPGKPCPVCGSI
HHPSPAEIVDDSLINELRARIERAKREEEDLKRELNDRIASLTNAAAKTRSMEYMVDSGK
KAVEEKKMKLKGLKERLPGDLREKDTASILLILDEREKGLLEESRNLQDWQTKIEELRME
IEKSGGLLSQNREKFEGVKSTFIAGEKAIKEVKARIEEARRELAAAVERLTAARGEVPVE
DIEKENSKIQNWDKLAADLGKKIRGLEAKVRETEEAIENLTSQKNELEIRINVIKSEGKQ
QREKYDDLKTKLEEITEGKPVQALIDEKTKILNSLREMEKQIKKEHEEALKLFNTAQENK
AGAERAFKLSNERFTKAKTKLHEAVKEAGFNSVREAEDSLSDAKQREKWRLEVEEYRQKE
TALEEDRRKLEHKLGGRCLTREEWDEWQNRLEKAKESYQRAVSERGGAKLEYESSKEKHT
KWIQLEKRRQALETQESMLKELQTVLRGNAFVEFIAEEQLIGVALDASAILGKLTKHRYA
LEVDSSGAFIMRDDANGGVKRPVTTLSGGETFLTSLALALALSSQIQLKGEYPLEFFFLD
EGFGTLDSELLEVVMDTLERLHEDNLTVGIISHVPELRNRLARRLIVDPAQPGGRGTRVK
IEIA
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgataaagttaaagattgccgggcttcacagctttagggaacctcaggttata
gactttgacaggctgtgcgaaacaggggtattcgggattttcgggcctaccggcagcggt
aaatccacaattctggatgcgattaccctggccctttacggtaaagtagaaagggctcct
cataatacccagggaatactgaaccatgccgaagacggtctgatggtggaatttgttttt
gaactgggtaatcgaaatctcaggaacaggtatatggttcagagggggtttgttagaggt
gagggcgtgcagttgaaaagcagtgcctgccgtcttgttcaatttattgacggcagagaa
ttggttttagctgatcggccgtcggaaattaccggtcaggtggagaaattactggggctt
aatgtagatgattttacccgggctgtagtgctgcctcaagggaaattttcagaatttctt
tcactcaaagggaaggaacgaaggcagatgctggaaagactctttaatctggaacaatac
ggcgatttgttaaaccagcggttgagccagaggctgaattctgtatcaggggaactgcag
ggcattatcggggaacagaagggtttaggggacgcttcagaagaagctgtaaaaatggct
gaaaaaaaatttcttgaagcccgggcaatggaaattaaatcggctgaatttttaaaaaaa
gtagaggaggaatacgaaaaacaaagacaattatgggaatggcagcaggaattagcagaa
gttattaaggccaggaggcagctcgatctcataaaagatgaaattgctttaaaggcaggg
aagttagatgcagccctgagagccgaagggataaggccttacctgaatgaagtaaaagaa
gccgaagatagccttatgaaggctaaaaaagacctggatcaagccgttattgagttagaa
cgatcgaaagagaaagtcagtaaaacccttgattcctttgaaaaggtttcccagaaacga
aacagggatgaaccgttattaattgaaaccctggcgaagcttgaacaggctaaaaactac
gaagaggaattgataaagctgagggggataataaagggattacaagaggaatatgaaagg
gttaataattccaggaaggttattgaaagccggttagaggaaatctgccggcagagagat
aaagatgaagaaagcatgaaaaatttaaaagaaaaactggaccgttttactgttacaccg
gagtatcgccttcagataggggaagccttcaatgcaaaacaatcatatttatctgccgaa
aagttaaccaggaatttagaagaggacttaaaaaccaagataaaggaacttgaacagatt
cagaatttgaagaataaaattcaggaagaagtaaggaacctggaagaaaaattagagaac
ctaaaggtcagattgagcgaaatgcaggcaaataaacccggtgatgaaggcagccttgct
gcgagaatgaaagaaattgctttgctcaggtcatcggtagaggaaatggccagatgtgaa
aaagaactggattttgagctcactgcccagaataaaaaggaaaaggagctgagggaagct
aaagaggaatatgaattgatagaaaaagattacaatagggttaaagccctttgtgaagag
accggtgtaaaagtcaagcagctggaaggagatttaaaagaatttgaacagcagaatctg
gcttcccggctggcagagaccctatatcccggtaaaccctgtccggtttgcggttcaatc
catcacccgtcccctgcagagatagtagatgattctctgataaatgaattgagggccaga
attgagcgtgccaaacgggaagaggaagacctgaaaagggaattaaatgatcgcattgct
tctctgactaatgcggcagcaaaaaccagatcaatggaatatatggtggattcgggcaaa
aaagccgttgaagagaaaaaaatgaaattaaaggggctgaaggagagacttcccggggat
ttgagggaaaaggatacggcttcaattttattaattctcgatgaacgggaaaaagggctg
ttagaggaaagccgcaacctgcaggattggcagacaaaaatcgaagaactgcggatggaa
attgaaaaaagcggtgggttattaagccaaaacagggaaaaatttgaaggggttaaatca
actttcatagccggggaaaaggccataaaagaggtgaaagcccgaatagaagaggcgcga
agggaattagccgctgctgtggagaggttaacggcagcgaggggagaggttcccgttgaa
gatatagaaaaggagaattccaaaatacagaattgggataaattggcggctgatttaggg
aagaaaataagagggcttgaggctaaagtcagggaaacggaagaagctatagaaaacctg
acctctcaaaaaaatgaactggaaatcaggataaatgttatcaaatctgaagggaaacag
cagagagaaaaatatgatgacttaaagaccaaacttgaagaaatcacggagggcaaaccc
gttcaggcccttattgacgagaagaccaagattttaaattctttaagggagatggagaaa
caaatcaaaaaagagcatgaagaagccctgaaactcttcaatacagctcaggaaaataaa
gccggggcagaaagggcttttaaactttctaatgagagatttacaaaggctaaaactaag
ctgcatgaagctgtcaaagaggccggttttaactctgtcagggaagcagaggattcgctt
tcggatgctaaacagagggaaaaatggagactggaggtagaagaatacaggcaaaaggaa
accgcattggaagaagaccggcgcaaactggaacacaaactgggaggcaggtgtttgacc
cgtgaagagtgggatgagtggcagaaccgccttgaaaaggccaaggaatcctatcaaagg
gcggtatcagaaagagggggagctaaactggaatacgaaagctcaaaagagaaacataca
aaatggattcaactggaaaaaaggcgtcaggctttagagacacaggaatcgatgttaaag
gaactgcagacggtattaaggggaaacgcttttgttgagtttattgcagaagaacagcta
ataggggtagctttagatgcgtctgctattttaggaaaacttacaaaacaccgttatgcc
ctggaggtcgattcaagcggggcctttatcatgagggatgatgcaaacggaggggtaaaa
cggcctgtcactaccctttcgggtggtgaaaccttccttacgtcgctggcactagctctg
gccctttcttcgcagatacagcttaagggtgaatatcccctcgagtttttcttcctggat
gagggcttcggaacccttgattcagagctgctggaagttgtaatggatacactggagagg
ctgcatgaagataatctaacggtgggtattataagtcatgttcccgagttaaggaaccgc
ctggcccgcagattaatagtcgatcccgctcaaccgggcggaagagggaccagggttaaa
atagagattgcttag
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