Koleobacter methoxysyntrophicus: H0A61_02111
Help
Entry
H0A61_02111 CDS
T07090
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
kme
Koleobacter methoxysyntrophicus
Pathway
kme00550
Peptidoglycan biosynthesis
kme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kme00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H0A61_02111 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kme01011
]
H0A61_02111 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
kme01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
H0A61_02111 (spoVD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QSQ09731
UniProt:
A0A8A0RMV2
LinkDB
All DBs
Position
2185864..2187921
Genome browser
AA seq
685 aa
AA seq
DB search
MPVTNVTVKKRLVLLLLITCIAYSALILRLAWLQLLKGEELQKKALHQWTKEIPVEPKRG
TIYDRKGRELAISASVDTVIAYPPEIENPEAAAEALSKILDMDEETILELITKERASVYL
KRKIDSEKSKEIRKLGIKGIGFTEESKRYYPDRNLAAHVLGFVGIDSQGLAGIEYYYDKY
LRGYPGRIVSETDALSRELPFGAQHFVPPKDGLNLVLTIDKTIQHFAERELEKAMNRHRA
KKGTVLVMDPRTGEILALVNKPDFDPNNYNDYPEESWKNIAISDVYEPGSTFKVITASAA
LEEKVVTPSTRYYDKGYTIVSGVRIGCWRHGGHGSQTFTQVVQNSCNPGFVDVAMKLGKE
KFVNYINAFGFGQTSGIDFPGEGKGIFNPEKIGPVELATLSFGQGISVTPLQLLTAMSAI
ANDGKLMQPYIAKQLVDDNGNIIHEFKPRVVRYVISESTSKEMIQILESVVTNGTGGNAY
LEGYRVAGKTGTAEKYIDGKYVSSFIGFAPADDPQVAILVILDEPQGIYYGGQTAAPVFR
QVMLDTLRYLGVTPQKQEDESDKIKVPNVINLYIQEACSVLIKKGLEYNIKGTGLIVAEQ
FPAPGTIVARGETVELLLIEGKTDKSPAVVPDLTGKTIREAGEILDIVGLKIQAVGNGLA
IDQEPKPGTKAELNTTVKVYFQQRN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgtaacaaatgtgacagtaaaaaagagattggtcttactgctgttaattacatgt
atagcatattcagcattaatccttcgattggcttggctgcagttattaaaaggtgaagaa
ctgcaaaaaaaagccctccatcaatggactaaggagattcctgttgaacctaagagggga
acaatatatgataggaaaggccgggaactggccatcagcgctagtgtagatacggttatt
gcctatccgcctgagattgaaaaccctgaagcagctgccgaggctttaagtaaaatactt
gatatggatgaagaaacaatattagaactgattactaaagaaagggcttcagtgtatctt
aaaagaaaaatcgacagcgaaaagagtaaggagataaggaagctcggaataaaggggatc
ggatttacagaagaaagtaaaagatattatcctgataggaatttggcggcacatgtttta
ggttttgtgggtattgatagtcaaggccttgcaggtatcgaatattattatgacaaatat
cttaggggatatccggggagaatagtttctgaaaccgatgcactcagcagagagctgcct
tttggtgcccagcattttgttcccccgaaagacggattaaatttagtactgacaattgat
aaaacaattcagcactttgctgagagggaactggagaaggccatgaacaggcacagagca
aaaaagggtactgttttagtaatggacccaagaaccggtgaaatacttgcattggtaaat
aaacctgatttcgacccgaataattataatgattatcctgaagaatcatggaaaaatata
gctatatctgatgtatatgaaccgggatcgacctttaaggttataacggcttctgcagcc
ctcgaggaaaaagttgttacaccgagcaccagatattatgataaaggttatacaattgta
agcggggtaagaataggatgctggagacacggtggtcacggcagccaaacctttacacag
gtggtccagaattcgtgtaaccccggttttgttgatgtggctatgaaactgggcaaagaa
aagtttgtaaactatattaatgcctttggattcggtcaaactagcggtatcgatttcccg
ggagaaggaaaaggtattttcaacccggaaaaaattgggcccgttgaactggcaacatta
tcctttgggcaggggatttccgttaccccgttacagcttttaactgcaatgtcggctatt
gcgaatgatgggaaactaatgcagccatacattgcaaagcaattggtggatgataatgga
aatataatccatgaatttaaaccgcgggtagttaggtatgttatttcggaaagcacatca
aaagaaatgatacagattttggaaagtgttgttactaatggaacaggaggaaatgcatac
ctggagggatacagggtcgccggtaagacgggtaccgctgagaaatatatagatggtaaa
tatgtttcttcttttatcggttttgctccagctgatgacccacaggttgcaattttagtt
atcctcgatgaaccccaagggatttattatggggggcaaacagctgcccctgtattcaga
caggttatgctggacaccctcaggtatttgggggttacaccgcaaaaacaggaggatgag
tcagataaaataaaggttcctaatgtaataaacctttatattcaggaagcctgttcagtt
ttaataaaaaaggggttagaatataatataaaaggaacgggtcttattgtggcagaacaa
tttccggcacccggtacaattgtagccaggggcgaaacagtggaattattattaattgaa
ggcaagacagataaaagccctgcagtggtacctgatttaacaggcaagactattagagaa
gccggtgaaatcctcgatatagttggcttaaaaatccaggctgtaggaaacggtttggcg
attgaccaagaaccgaagccggggacaaaagccgaactcaatacaacggttaaagtttat
ttccaacagagaaattaa
DBGET
integrated database retrieval system