Koleobacter methoxysyntrophicus: H0A61_02312
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Entry
H0A61_02312 CDS
T07090
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
kme
Koleobacter methoxysyntrophicus
Pathway
kme03030
DNA replication
kme03430
Mismatch repair
kme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H0A61_02312 (polC)
03430 Mismatch repair
H0A61_02312 (polC)
03440 Homologous recombination
H0A61_02312 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kme03032
]
H0A61_02312 (polC)
03400 DNA repair and recombination proteins [BR:
kme03400
]
H0A61_02312 (polC)
Enzymes [BR:
kme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H0A61_02312 (polC)
DNA replication proteins [BR:
kme03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H0A61_02312 (polC)
DNA repair and recombination proteins [BR:
kme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H0A61_02312 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
tRNA_anti-codon
HHH_3
RNase_H_2
DUF655
DNA_pol_A_exo1
SAM_GIDA_C
YhfH
Motif
Other DBs
NCBI-ProteinID:
QSQ09931
UniProt:
A0A8A0RNF6
LinkDB
All DBs
Position
2363333..2367601
Genome browser
AA seq
1422 aa
AA seq
DB search
MSGNLKFSTIIEERLRQYSSWYRISKIRIFPQNQLCIVFLQTKEKLPNDDLILIEREINN
LLNIGNIKIQHCIANYSINEYLESNWGNILNLIYKKTPSINSWLNNLKWEIRENTLVIKL
SDQIGVEILNNKNVPNQIRDILYNETGNEVVVTLEKSSDLDECHDDYYTRKIYKEKQLVE
DILKQNNLSLCDDKKKQIFSDSSIILGKEIKEEPIKLDEIKEEGQEVVIQGRIFDVQSRH
IKNNNILIFFSITDFTGSIYIKTFAKATNNTASLSGLREGIWLKIKGQVEYDNFLKDLIV
NPTDINVVNFNIRTDSNPEKRVELHLHTNMSAMDGINPPEAYIKRAAEWGHPAIAITDHG
VVQAFPDAYSYGRNYGIKIIFGVEAYIMDDEIEIIKNPKDIDIAAETFVVFDIETTGLSP
SEDEITEIGAVKIKNGKVIGEFHTLVNPGKPIPVDITKLTGITDEMVKDAPGINTVLAEF
LEFVGDSTIVAHNAQFDMGFIYNKCEERDIVIKNPVLDSLYLSRVLLKELKNHKLNTIAN
HLNVRLDNHHRAVDDAKATGEIFWELVKRLMERGIKNLTEINELTGELGSQRLKTYHALI
LAKNQRGLKNLYKLISLSHLNYFYRNPRIPKKELVALKEGLIIGSGCQAGEIYQGILNGL
NPEELKRKCKFYDFLEMQPIMNNYFLVNKGLVSDTEKLKSINKQIYDLGKSLNIPVVATG
DVHFLEPEDEVFRRVLMASQGYEDADNHLPLYFKTTDEMLNEFEYLGREAAREIVIRNPR
AISDSIEDIKPLPDELFTPKIDGAEQTITEMTYNKAKEIYGDPLPDIVEKRLKKELDSIV
NNGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATMCDITEVNPLPPHYVCQRCKYS
EFHLDEKYGTGPDLPDKNCPRCGEELRKDGYNIPFEVFMGFEGDKVPDIDLNFSGEYQPI
AHKYAEELFGEKYVYRAGTIGTIAERTAYGFIKGFMEEKKVVLHKAEIDRLVKGCTGIKR
TTGQHPGGLMVVPKDMDIHDFTPIQYPADDRNSNVITTHFDYHAISSRLLKLDILGHDDP
TVLKMLQDITGVDPKKIPLDDKKTMKIFSGIEPLNLKTNDLNISIGTIGVPEFGTKFVRQ
MLEETKPTTFSELIRISGLSHGTDVWLNNAQDLIKNKIATLSQVISTRDDIMTHLIHKGL
PPNKAFKVMEKVRKGKGLDKEDEELMKSKGVPDWFIGSCKKIKYMFPKAHAVAYVIMAFR
IAYFKVYFPKAFYATYFSVKADDFDADIILKGPRYIKNRIEEIEAKGNNMTQKEKNLLTI
LEVAWEMYSRGLTFLPVDLYKSDAERFIIIKDGLILPFNSLQGVGKTAAHNIVKCRENGK
FISVEDLRRRAKLTKTAIDVLRRHGCLEDLLETNQLNFLSLA
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagggaacctcaaattttcgacaataattgaagagcggttaagacaatattcaagc
tggtatcgaatttcaaaaattcgaatattcccccaaaaccaactgtgtatagtatttctt
caaacaaaagagaaactgccaaatgacgatttaatcttaatcgaacgcgagataaacaat
ttattaaatatagggaatataaaaattcaacactgtatagcgaactattctattaatgag
tatcttgaatccaactggggaaatattcttaatttaatatataaaaaaacaccttcaata
aatagctggcttaataatttaaagtgggaaattagagaaaacacattggtaataaaattg
agcgatcaaataggagttgaaatactaaataataaaaatgttcctaatcagattagggat
attttatataatgaaaccggtaatgaagttgtagtaactttggaaaagtcatcagattta
gatgaatgtcatgacgactattacacccggaaaatatataaagaaaagcaattagtagag
gacatactaaagcaaaataacttatctttgtgtgatgataagaagaaacagattttcagt
gattccagtatcattttagggaaagaaataaaagaagaacctattaagttagatgaaatt
aaagaagaaggccaggaagtagttatacaagggcggatctttgatgttcaatcaaggcat
attaaaaataataatatcttgatttttttttctataaccgattttaccggttctatttat
ataaaaacatttgcgaaggctaccaataatacagcatccttaagcggattaagggaaggg
atatggctgaaaataaaaggtcaggtagaatatgataattttctaaaagaccttattgtt
aatcccactgatataaatgtagtaaattttaatattcgaacagacagtaaccctgaaaag
agggtagaattacatcttcacactaatatgagtgcgatggatgggattaatcctcctgag
gcatatataaagagagcggctgaatggggacatccagctatagctattaccgatcacggt
gtagtccaagcctttcctgatgcttattcatacggccgaaactatggtataaagattata
ttcggtgttgaggcttatattatggatgatgaaattgaaattataaaaaatcctaaagac
attgatattgccgcagaaacctttgtagtttttgatattgagacaaccggattatctcct
tcagaagatgaaatcacagaaataggggcagtaaaaataaaaaatgggaaagtcattggg
gaatttcacactttagttaatcccggaaaaccgataccggttgacataacaaaattaaca
gggattactgatgaaatggttaaagatgctccgggaataaacactgttttagctgaattc
cttgaatttgtgggggattcaacgatcgtagctcataatgcccagtttgatatgggattt
atatataataaatgtgaagaaagggatattgtaataaaaaaccctgttttagattcattg
tatttatcaagggtattattaaaagaactcaagaaccacaaattaaataccatagcaaac
cacttaaatgttagacttgataaccatcacagagcggttgatgatgctaaagcaacggga
gaaatattttgggaactcgtaaaaaggttaatggaaaggggaattaagaatttaacggaa
ataaatgagctcaccggcgaattaggctctcaaaggttaaaaacatatcacgctttaatt
ttagcaaaaaatcagaggggattaaaaaatctttataaattgatttcactgtctcactta
aattatttttatagaaacccgcggattcccaaaaaggaattagttgccctaaaagaagga
ttgattataggttcaggctgtcaggcaggagaaatatatcaggggattttaaatggatta
aacccagaagaactcaaacgaaaatgtaaattttatgatttcctggaaatgcagccgata
atgaataattattttctagttaataaaggcctggtgagcgataccgaaaaattaaaatct
attaataaacagatttatgatttaggtaaatctttaaatatccctgttgtagcaacaggg
gatgtccattttttggagccggaagatgaggttttccgaagggttttaatggcgagtcag
gggtatgaagatgccgataaccacttaccgctgtactttaagacaaccgatgaaatgcta
aatgaatttgaatatctaggccgagaagctgcaagagaaattgtaatacgtaatccgagg
gctatatccgacagtatagaagatataaaaccacttccagatgagctatttactccaaaa
attgatggtgcagaacaaactataacggagatgacctataataaagctaaagaaatctat
ggtgacccacttcccgatattgtggaaaaaagacttaaaaaagaattagattctattgtt
aataacggatttgcagtaatataccttatatctcataaactggttaaaaggtctttagat
gatggttatcttgttgggtccaggggatctgtagggtcttctttagttgctactatgtgt
gatataacagaggttaatcctttaccacctcactatgtatgccaaaggtgtaaatacagc
gagtttcatttagatgagaaatacggtaccgggccagacctccctgacaaaaactgtcct
cgctgtggtgaagaattaaggaaagatggatataatattccttttgaagtttttatgggt
tttgaaggtgacaaggtgcctgatatcgatttgaacttttcaggagaatatcaacccata
gctcacaaatatgcagaagaactgtttggtgaaaaatatgtttacagagcaggaacaata
ggtacaattgcggaaaggacggcctacggttttattaaaggatttatggaagaaaaaaag
gttgtacttcataaagcagagatagatagacttgttaaaggatgtacaggaataaaaaga
accacaggtcagcatccgggagggttaatggtagttccgaaagatatggatatccatgat
tttactcctatacagtatccggctgatgacagaaattctaatgtaataacaactcatttt
gattatcatgctataagcagtagattgcttaaattggatatccttggtcatgatgacccg
acggtattgaaaatgctgcaggatataacgggggtagacccgaaaaaaatccctttagat
gataaaaaaacaatgaaaatcttttctgggatagaacctttaaatttgaaaactaatgac
ttaaatatctctataggaacaataggggttccagagtttggaactaaatttgtaagacag
atgctggaagaaacgaaacctactactttttcagaacttataagaataagtggattatct
catggaaccgacgtatggttaaataatgctcaggatttaattaagaataagattgctacc
ctttctcaggttatttcaaccagagatgatataatgacacatttgatacataaggggtta
ccgccgaataaggcatttaaagttatggaaaaagtaaggaaaggtaaaggacttgataag
gaagacgaagaattaatgaaatcaaagggggttcctgattggtttataggatcttgtaaa
aaaatcaagtatatgtttccgaaagctcatgctgttgcatatgttataatggcatttaga
atagcgtatttcaaggtatattttcctaaagcattctatgccacttatttttccgttaaa
gctgacgattttgatgcagatattatcttgaagggcccgagatatataaagaatagaata
gaagaaatcgaagctaagggaaataatatgacacaaaaagaaaagaatttgttaacgata
ttagaagttgcctgggaaatgtattcaagaggattaacctttttgcctgttgatttatat
aaatcggacgctgagagatttattataattaaagacggtctaattctgcctttcaattcc
ttgcagggggtcggcaaaacggcagcccataatatagttaaatgtagagaaaatggcaag
tttatatctgttgaagaccttagaagacgagcaaaattaactaaaaccgctatcgatgtt
ttaagaagacatggttgccttgaagaccttttagaaaccaaccaattaaatttcttaagt
cttgcatag
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