Kwoniella mangroviensis: 30160323
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Entry
30160323 CDS
T10313
Symbol
I203_104545
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
kmg Kwoniella mangroviensis
Pathway
kmg03020
RNA polymerase
kmg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kmg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
30160323 (I203_104545)
09124 Replication and repair
03420 Nucleotide excision repair
30160323 (I203_104545)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmg03021
]
30160323 (I203_104545)
03400 DNA repair and recombination proteins [BR:
kmg03400
]
30160323 (I203_104545)
Enzymes [BR:
kmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
30160323 (I203_104545)
Transcription machinery [BR:
kmg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
30160323 (I203_104545)
DNA repair and recombination proteins [BR:
kmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
30160323 (I203_104545)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF7518
AcetDehyd-dimer
Motif
Other DBs
NCBI-GeneID:
30160323
NCBI-ProteinID:
XP_019006915
LinkDB
All DBs
Position
1
Genome browser
AA seq
1804 aa
AA seq
DB search
MTVTFPYSSAPAKQIKEIQFGVMSPEEIKAFSVAKIEYTEVMDEATNRQKVGGLMDPKMG
TIDRNFKCQTCLEGMAECPGHFGHIELARPVFHAGFIIKVKKILECVCYSCGKLKVDMRD
PMVANVVRRVKAQHRLRAVWVLAKDKKVCETDSLEDNQDGDATAEDQFMAEQGKPKGHGG
CGHEQPLWRKKGLKLTGIWKPTDKGEDTAEPEERNVSPGEVHNILKKIPPEDLHIMGLNA
EYARPDWMILTVLPVPPAAVRPSIAIDGGALRSEDDLTYKLQSIIKFNGIVRRMEAEGVP
PSVVNEQFDLLQYHVATYMDNEIAGLPRDQHKAGRAIKAIRARLKGKEGRMRGNLMGKRV
DFSARTVITGDPNLQLDQVGVPRSIAMTLTYPERVTPYNIVYLQTLVNNGPATYPGARYY
VKDTGERVDLKYRKSGEPISLQFGWIVERHLKDGDFVLFNRQPSLHKMSMMSHRVKLMNY
STFRLNLSVTSPYNADFDGDEMNLHVPQSEETRAELSQIAWVPRQIVSPQANKPVMGIVQ
DTLCGIRKFTLRDNLLDWLQVQHILLWTVGWDGTIPPPAILKPKPMWTGKQLLSMTIPKG
INITKKNNEKPSPIDVTDENVLIDNGELIYGTIVKNMAGAANDGLVHVIFRELGPVAARD
WFSACQQMINFWLLHYGFSVGIGDTIVDKATMAGITNRMVEAKEAVQRLISEAEANKMKP
KPGMTIRETLEASIANELNKARDWTGKTTQDNLKGDNNVKQMVVSGSKGSFINISQMSGV
VGQQFVEGKRITFGFKHRSLPHFSRDDYGPESRGFVENSYLRGLTPQEFWFHAMGGREGL
IDTAVKTAETGYIQRRLVKAMEDLKVGYDGTVRNSVGDVVQFLYGEDGMDGSAMEKQSLD
IIRLSNKAFERRYKIDVLSATGGFKKGALQAGIDQSSVELQTLLDEEFRQYTEDRQLLRD
HIYTDGTPGHPLPVNIQRVIQNSQQIFHIDPRVPSDLDPAYLIEQRQALSDRLVVVRGDD
KLSRDAQHNATLVFNMLLRSHLATRRVIEEYHLNREAFDWVIGEIEQIFNKAVVNASEMV
GTLAAQSIGEPATQMTLNTFHYAGVASKSVTGGVPRLKEIINVAVNIRTPALNVYLDPEY
SRTEEDAHQIMRKLTYTRLRDITASVEIFYDPKLDSTDIEEDQDFVDAFFAIPDEDIRLE
LHSPWLLRLELDRAKVLEGGYEMSQIVNAIAEQVGKDVFVIHSEDNAPKLIIRLRVVAEK
EDEELLGDEDMFLKRIEGTLLDQVVLGGIKGIQRVFISEGKQVVLSQHGEYDQAKEWFLE
TDGINLKEVMAVDGVDGPRTYSNNCYEVYTTLGIEGARNALYKELNGVIEMGGSYVNYRH
LALLCDLMCSKGSLMSITRHGINRTDAGALSRSSFEETVEILLEAAAVGDVDDCRGVAEN
VLLGQMAPMGTGAFDVSLDMNMLKDVIVDHRLPVQNMLAASGGLAGGMTPGGAMTPYDNF
SPMWDGAKGSVGSAAFSPMQTSNNEEGGNFAYMGYGTSPMHGGMSPAAAGYSPSSPAGYS
PTSPFAVTSPAYSPTSPFAGAGAASPWVPRGGFGGATSPAYSPTSPQYSPSSPQFSPASP
SFSPSSPTYSPASPAYAGTGASAGMNRASPYSPASPAYSPTSPMGGMGVTSPQYSPTSPR
YSPASPAFSPTSPTYSPTSPAAFQATSPRYSPTSPQFSPTSPTYSPASPTYSPASPAYSP
ASPAYSPASPAYSPASPAYGVNGNAAQANGQNGPGQRPNGNANGQVKPGWGNTGTYGASP
SWKS
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcactttcccatactcgtcggctccggccaagcagatcaaggagattcagttt
ggtgtgatgagtcctgaggagattaaagcattctctgtggccaagatcgaatatacagaa
gtgatggatgaggctacgaacaggcagaaagttggaggtctgatggatcctaaaatgggc
accatcgaccgtaatttcaaatgtcaaacgtgtctggaaggtatggcagaatgtccaggt
catttcggtcatatcgaattggccagaccagtctttcacgccggtttcatcattaaagtg
aaaaagatcttggaatgtgtctgctatagttgtgggaaactcaaagttgacatgcgagat
ccaatggttgcgaatgtcgtacgaagagtaaaagcccagcatcgtctacgagctgtttgg
gtattggcgaaagataagaaagtctgtgagactgattcgctggaggacaaccaggatggt
gatgcgacagccgaagatcagttcatggctgaacaggggaaacccaaaggtcatggtgga
tgtggtcacgagcaaccgttatggcgaaagaagggtctaaagcttactggtatatggaaa
cctacggataagggagaggatactgctgaacctgaagaacgcaacgtatctccaggagag
gtccataatatcctcaagaagatcccacctgaagatttgcatatcatgggtctgaacgct
gaatacgctagaccagattggatgattcttacagtattgcccgtcccaccagcagctgtc
cgaccttcaattgccatcgatggaggagctttacgaagtgaagatgatttgacgtacaaa
ttacaatcgatcatcaaattcaatggtatcgttaggcggatggaagcggaaggtgtacct
ccgagtgtggtcaacgagcaattcgatttactgcagtatcacgtcgctacttatatggac
aatgagattgctggtttaccgagggatcagcataaagctggaagagctatcaaagcgatc
agagccagattgaagggaaaagaaggtagaatgagaggaaacttgatgggtaaacgagtg
gacttctcagctcgtacggttattaccggtgatcccaatctgcaattggatcaggttggt
gttcccaggagtatagccatgactctgacttatcctgagagagtgaccccatacaatatc
gtctatctgcaaactctggtgaacaacggtcctgcaacgtaccctggtgccaggtattac
gtcaaggatactggagaacgtgtggatttgaagtataggaaatccggtgaacccatcagt
ttgcagtttggttggatcgtagagagacacctcaaggatggagacttcgttctattcaat
cgtcaaccgagtttgcataaaatgtctatgatgtcgcatagggtcaaacttatgaactat
tccactttccgtctgaatctttcggttacttcaccttataatgccgatttcgatggtgac
gaaatgaacttgcacgtgccgcaaagcgaagagacacgagcagaactcagtcagatagct
tgggttcccagacagattgtctcgccgcaggcgaacaagcccgtcatgggtatcgtgcaa
gatactctctgtggtatccgaaagtttaccctacgagataaccttctcgattggctacaa
gtgcagcatatcctcctttggacagttggctgggacggtacaataccgccgcctgctatt
ctgaagcctaaaccaatgtggactggtaaacagcttctatcgatgacaattcccaaaggt
atcaatataaccaaaaagaacaacgagaagccatcacccattgatgtgaccgatgagaat
gtgttgatagataacggtgaattgatatacggtaccatcgtaaaaaatatggctggtgct
gccaacgacggtttggtacatgtcattttccgagaattgggtccagtagcagcccgagat
tggttttcagcttgtcaacagatgatcaatttctggctattacattacggtttctcggtt
ggtatcggtgataccatcgtcgacaaagctacaatggcaggaattacaaatcgaatggtg
gaagctaaagaggcggtacaaaggttgatctcagaagcagaggcgaacaagatgaaacct
aaaccaggtatgacgattagagaaaccttagaagcatcaattgccaatgaattgaacaaa
gcgagagattggaccggtaaaaccacgcaggataacctgaagggagataacaacgtcaaa
cagatggtagtgtctggatcaaaaggttctttcatcaatatttctcagatgtcaggtgtc
gtaggacaacagttcgtcgaaggaaaacgtataacgtttggattcaagcatcgttcatta
ccgcatttctccagggatgattacggtccagaatcaagaggtttcgtagagaattcgtat
cttcgaggattaactcctcaagagttctggttccatgccatgggaggaagagaaggattg
attgatactgcagtgaaaactgctgaaacgggttatatccagagaagattggtcaaagcg
atggaagatctcaaagttggatatgatggtacggtgagaaactcggttggagatgtggta
caattcttatacggtgaagatggtatggatggttctgcaatggagaagcagagtctcgat
atcatccgtctatcaaataaagctttcgagcgaagatacaagatcgacgtcttgagtgcg
acaggtggtttcaagaagggtgctttgcaagcaggtatcgatcagagctcagtggagttg
cagacgttactcgacgaagagttccgtcaatatactgaagatcgacaattgctcagagac
catatctacaccgatggtactcctggtcatccgcttcctgtcaatattcaacgagtcatc
cagaactctcagcagatcttccatattgatcctagagttcctagtgatctagacccggca
taccttatagagcagcgacaagctctttcagatcgattggtggtggttcgaggtgacgac
aagctcagtagagatgctcagcataacgccactctcgtcttcaacatgctccttcgatca
catcttgctactcgacgagtgatagaagagtatcatctgaatagagaagctttcgattgg
gttattggagaaatcgagcagatcttcaataaagctgtcgtcaacgcatctgaaatggtc
ggaactctcgcagctcagtctatcggtgaacctgctacccaaatgacattgaacaccttc
cattatgcgggtgtagcttccaaatctgttaccggtggtgtaccccggttgaaagaaatc
atcaacgtcgcggtgaacatccgaactcccgcgctgaatgtttatcttgatcctgaatat
agtcgtacggaagaagacgcgcatcagatcatgcgaaaactcacctacacccgtctcaga
gatatcactgcatcagttgagatcttctacgatcctaagctggattcgacagatatcgaa
gaggatcaagatttcgttgatgcgtttttcgctatcccagatgaagatattcgattggaa
ttacactcgccatggttgcttcgtttggaacttgatcgagccaaggtattggaaggtggt
tatgagatgtcccaaattgtaaatgccatagcagaacaagttggaaaagatgtctttgtg
atacactcagaagataacgctcctaaattgatcatccgactgagggtagtggccgagaaa
gaagatgaagagttactaggtgacgaagatatgttcttgaagcgaatcgaaggtaccttg
ttggatcaagtggtgttgggtggtatcaaaggtattcagagagtgttcatctcagaaggt
aaacaggtggtgctttctcaacatggtgaatacgatcaagcgaaagagtggttcctcgaa
acggatggtatcaacctgaaggaggtcatggctgtagatggtgtagatgggccgcgaacc
tactcaaacaactgttacgaggtatacacaactctcggtattgaaggtgctcgaaatgca
ctatacaaggaattgaatggtgtcatagaaatgggtggttcatatgtcaattaccgacac
ttggctttactctgtgatcttatgtgttccaagggatctttaatgtcaatcactcgacat
ggtatcaaccgtacggacgctggtgccttatcgcgatcatctttcgaagagaccgtcgag
attctcttggaagctgcggcagtaggtgacgtcgacgattgtcgaggtgtagcggagaat
gtacttcttggtcaaatggcacctatgggaacaggagcgtttgacgtatccctagacatg
aacatgttgaaggatgtgattgtcgatcatcgactacctgttcaaaacatgttggctgcc
tctggtggattagcgggaggtatgacacctggtggagctatgacgccctacgacaatttc
tcaccgatgtgggatggagcgaaaggatcagtcggatcagctgctttctcaccaatgcaa
acttcaaacaatgaggaaggtggaaacttcgcctatatgggatacggaacctcaccaatg
cacggtggaatgtcgcctgcagcagctggatattcaccttcttcacctgctggatattcc
cccacttccccattcgcagttacaagtccagcctattcgcccacctcacccttcgcaggt
gctggcgcggcttcaccttgggtaccaagaggtggatttggaggagccacttcacctgct
tattcacctacttcacctcaatactcaccgtctagtcctcaattctcacccgcctcgcct
tccttctcaccctcttcacccacgtactcgccagcctcacctgcatatgcaggaacaggt
gctagtgcaggtatgaaccgagcttcaccttattctcctgcttcgcctgcctattcccct
acttcaccaatgggaggtatgggagtcacctcaccacagtactctcctaccagtcctaga
tactcgcctgcttcgcctgcgttctcacctacctcaccgacttatagtccaactagtccg
gcggcattccaagctaccagtccgagatattctccaacgagtcctcaattcagtcctact
tcacctacttactctcctgctagtccgacatactctcctgcaagtccagcttattcccca
gctagtccagcttacagtcccgcctcacctgcttattcgccagcatcacctgcatacggt
gtgaatggcaatgcggctcaggccaacggacaaaatggacctggacagagacctaatgga
aatgccaatggacaagtaaaacctggatggggtaatacaggtacatatggtgctagtcca
agttggaagagttga
DBGET
integrated database retrieval system
