Kwoniella mangroviensis: 30162838
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Entry
30162838 CDS
T10313
Symbol
I203_101388
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
kmg Kwoniella mangroviensis
Pathway
kmg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
30162838 (I203_101388)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmg03021
]
30162838 (I203_101388)
03019 Messenger RNA biogenesis [BR:
kmg03019
]
30162838 (I203_101388)
Transcription machinery [BR:
kmg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
30162838 (I203_101388)
Messenger RNA biogenesis [BR:
kmg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
30162838 (I203_101388)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
30162838
NCBI-ProteinID:
XP_019004896
LinkDB
All DBs
Position
1
Genome browser
AA seq
700 aa
AA seq
DB search
MSVPLPSPSPLTPPIIASPSRGEGGASAKAIPRSRPTPISTGQAHSPSSPSFRSRPQPPS
SISRSLLNDDNWRDRSPVPTTATAATPSTATTANATSGKAKVVGGFEKREIKSAGLNAVS
GLSANKDKKDGKRDSKDKDEAEGDKALSHVPCRFFKAGACTAGDSCPFSHAAPDAAKREI
CQWFLKGNCKFGHKCALAHVRPGEPMSMDRKNKKAAQLEARERGDSLGASSAPPPAPSSG
TGTGNTNGLGESPRPLGIMRGRKNSTSPGQEQVASPVPIKSALSTSMQSPQTGRLPSSPL
REPFGPPSGALPNSPNSAGFAHPRGIQGFASSPSRPSPLSASFGASGSVPGPLSLKASSS
NPLGSPLRPPVTTAPGFSSSFSHPSLLNQAHASSPTVPLSASFAGDNNSNLHKSIWTRSD
TPDEPLSPQRRRPIPKPTKSNQDAVFIDDEDHGEDFLPSSLSELLTPRERARRMSRRDSQ
GQEDFASASPSASASAGRYRNALWGNGDGNDHGRLAQSAGPNLGPNAGGFLQSLWSAEGE
DARKHQAPNGEGNDNGEDGNEGFAFGPSTAQQPKRQTSLLTQQRSPTSPTSPNKQIPSPS
AIRSQIGDTYLLRNQSSSPSATRVLQEHLPGQSLPGGLASALSRLHMQNAVSNTSGRVEE
DDGLGLEGTVPLPGKKVGNGQNAHQGHEHDEEEGLFDMDG
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgcccttaccatccccgtcacctcttaccccacccattatagcttctccttcc
aggggtgaaggcggagcttcagcaaaggccatccctagatcacgtcctacgcccatctcg
accggccaggcccattcaccttcatctcctagcttccgaagtcgacctcaaccaccttcg
tcaatttctagatccctgttgaacgacgataattggcgcgaccgttcacctgttcccaca
acagctaccgccgctacaccttctactgcgacaactgcaaatgcgaccagtgggaaagcc
aaagtggttggtgggttcgaaaagagggaaatcaaatctgcgggattgaatgctgtttcg
ggtctctcagcgaataaggataagaaggatggaaaaagggatagcaaagataaagatgaa
gcggaaggtgataaagccctcagtcacgtcccatgtagattcttcaaggctggcgcttgt
actgctggtgacagctgtcctttctcccatgctgctcctgacgccgctaaaagagaaatc
tgtcaatggttcttgaaaggaaactgtaaattcggtcacaaatgtgccctcgcacacgtc
cgacccggagaacccatgtcgatggaccgaaagaacaagaaggccgctcagctcgaggct
agagaacggggtgattcactcggtgcatcctctgctcctcctcctgcaccatcctctggc
acaggtacaggtaacaccaacggtctaggcgaatctcctcgaccgttaggtatcatgcga
ggaaggaagaacagtacttcacccggacaagaacaagtggcttcaccagtacctatcaag
tcggctctttcaacttctatgcaatcccctcaaactggtagattaccctcttcacctctt
cgagaacctttcggtcctccctcaggagctttacccaactcgcccaactcggctggattt
gctcatccgagaggtatccagggattcgcttcatctccaagtagaccttcacccctttcc
gcctcgttcggagcaagcggttcagttccaggtccactatctctcaaagccagctcgtca
aacccacttggatctcccctcagaccacccgtcacgaccgcaccgggattctcgtcctct
ttctcacacccctcattgctcaatcaggctcatgcaagttcaccaaccgtaccactttca
gcctcattcgcaggagataacaattccaacttgcataaatccatttggacccgatccgat
acgcctgacgaacctctttcgcctcaacgacgaagacctattcctaaacctactaaatcg
aaccaggacgccgtgtttatcgatgatgaagatcacggagaggacttcttaccttcttcg
ttatctgaattactcactcccagggaaagagctagaaggatgtccaggagggattctcaa
ggacaagaagatttcgcatctgcttcacctagcgccagtgccagtgcaggcaggtacaga
aatgctttgtggggcaatggtgacggtaatgatcatgggagattggctcaatctgctggg
ccaaaccttggtccaaatgctggagggtttttacaatcactttggtcagctgaaggtgaa
gatgctagaaaacatcaagcaccaaacggagaaggtaatgacaatggtgaggatgggaac
gagggatttgcattcggaccttcaacagctcaacaacctaaaagacaaacttctttactc
actcaacaaagatcacctacttcgcccacgtcgccaaacaaacagatcccttccccttct
gcgattagaagccaaattggtgatacttacctattgagaaatcaatcctcttcaccatct
gctacgagggtccttcaggaacaccttcctggacaatctctacctggtggattggctagt
gcactatcgagattacatatgcaaaatgctgtcagtaacaccagtggacgggtggaggaa
gatgatggattgggattggaaggaacggttcctttgcctggtaagaaggtcggtaatggt
cagaatgctcatcagggacatgaacatgatgaggaggaaggattgttcgatatggatggt
taa
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