Kwoniella mangroviensis: 30164678
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Entry
30164678 CDS
T10313
Symbol
I203_107971
Name
(RefSeq) mRNA 3'-end-processing protein YTH1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
kmg Kwoniella mangroviensis
Pathway
kmg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
30164678 (I203_107971)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmg03021
]
30164678 (I203_107971)
03019 Messenger RNA biogenesis [BR:
kmg03019
]
30164678 (I203_107971)
Transcription machinery [BR:
kmg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
30164678 (I203_107971)
Messenger RNA biogenesis [BR:
kmg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
30164678 (I203_107971)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_4
zf-CCHC_2
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
30164678
NCBI-ProteinID:
XP_019002384
LinkDB
All DBs
Position
3:392756..394127
Genome browser
AA seq
351 aa
AA seq
DB search
MAAAASSSTPLDPHLGRAADFVRPDFHQVNLDIEGFLKTQKGYKLDADTQICPLSLTPLG
CPLPPSQCPYRHTNPSPANFQPPPPLPPHPREREKKLTVCKHYLRNLCKMGDNCEYTHDW
NLRTMPVCVMFVKQGKCELGGECLYFHPRDRRVECPDYKRGFCLLGPECPRKHIRKRLCG
AYQSGFCPDGEKCKLSHPPADRPQSEEYINPVPPDPTQFTGPPPQLPAGYGRWREYRYDP
NAVVVPAPAWVEGGSLSGWRAGGFLSSNARRNEDRDGHGHGHGGHGGRSNDNRDNREVPQ
NAPAGYEKKTGWVKDLSTVLCFRCNQYGHFANTCPNQAVPGDRGGLKRERD
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcagccagttcgtcaacacctctcgaccctcatctgggtagagcagcagat
ttcgtccgaccggatttccatcaggtcaacttggacatagagggatttctaaagactcag
aagggatataagcttgatgctgatactcagatatgtcccttatccctaacacctctcgga
tgtcctctcccaccttcacaatgtccctatcgtcataccaatccctctccagcaaatttc
caaccacctcctccactccctccccaccctagagaacgggaaaagaaattaacagtgtgt
aaacattacctccggaatctatgtaagatgggagacaattgtgaatacacacacgattgg
aatctacgtacgatgcctgtctgcgtgatgtttgtgaaacaagggaaatgtgaattgggt
ggtgaatgtttgtattttcatcctagagatagaagagttgaatgtccagattataaaaga
ggtttttgtctattgggaccggaatgtccgagaaaacatattaggaagaggttatgtgga
gcttatcagagtgggttctgtcctgatggagagaaatgtaaattatcgcatcccccagca
gaccgacctcaatctgaagaatatataaaccccgtccctcctgaccctacgcaattcacc
ggtccaccaccccaactaccagcgggatacggccgatggcgggaatacagatacgatcct
aacgctgtggttgtgcctgctccggcatgggtggaaggtggttctctcagtggatggaga
gcaggtggtttcttgtctagtaacgcaaggaggaatgaagatcgagatggacatggccac
ggacatggcggacatggtggtagatcaaatgataatagggataatagggaggtaccgcag
aatgctcctgcggggtatgagaagaaaactggttgggtcaaggatctaagtacggtattg
tgttttagatgcaaccaatatggtcatttcgcaaatacatgtccgaaccaagctgtccca
ggtgatagaggtggattgaagagggagagggattag
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