Kwoniella mangroviensis: 30166576
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Entry
30166576 CDS
T10313
Symbol
I203_100703
Name
(RefSeq) ATP-dependent RNA helicase SUB2
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
kmg Kwoniella mangroviensis
Pathway
kmg03013
Nucleocytoplasmic transport
kmg03015
mRNA surveillance pathway
kmg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
30166576 (I203_100703)
09122 Translation
03013 Nucleocytoplasmic transport
30166576 (I203_100703)
03015 mRNA surveillance pathway
30166576 (I203_100703)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmg03019
]
30166576 (I203_100703)
03041 Spliceosome [BR:
kmg03041
]
30166576 (I203_100703)
Enzymes [BR:
kmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
30166576 (I203_100703)
Messenger RNA biogenesis [BR:
kmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
30166576 (I203_100703)
Spliceosome [BR:
kmg03041
]
Complex C
Other components
EJC/TREX
30166576 (I203_100703)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
30166576 (I203_100703)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
DNA_ligase_A_N
Ned1_M
Motif
Other DBs
NCBI-GeneID:
30166576
NCBI-ProteinID:
XP_019000718
LinkDB
All DBs
Position
1
Genome browser
AA seq
430 aa
AA seq
DB search
MSRPDEEELVDYDEAAEETFAPAATAATNGDKADGDKKGSYVGIHSTGFRDFLLKPELLR
AISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLACLQQIEPVDGEVSIVI
LCHTRELAYQIRNEFARFSKFMTNVRTGVFYGGTPISADQEILASKEKCPHIVVGTPGRT
MALVRDKKLNATKVKHFVLDECDKMLETLDMRRDVQEIFRATPHHKQVMMFSATLSKDIR
TTCKKFMQSPLEIYVDDETKLTLHGLQQYFLKLEEKEKNRKLNDLLDNLEFNQVCIFVKS
VARATQLDALLQECNFPSICIHSALPQQERISRFQQFKAFEKRILVATDIFGRGIDVERV
NVVINYDAPADADSYLHRVGRAGRFGTKGLAISFVSSDGDSEVLQKIQERFTVAIPTLPE
TIDPATYMTS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacctgatgaagaagagctcgttgattacgatgaggccgccgaggagaccttc
gccccagctgctacagccgctaccaatggtgacaaagcagatggtgataagaaaggttct
tatgtcggtatccactcgacaggtttcagagatttcctcttaaaacctgaattacttcga
gccatctcagatctcggttttgaacatccttccgaagttcaacaagaatgtatccctcaa
gctatcttaggtactgatgtattgtgtcaagctaaatccggtatgggtaagaccgccgta
ttcgtactcgcttgtttacaacagatcgaacctgtcgatggagaggtatcaatcgtgatt
ttatgtcacactcgagaattggcctatcaaattcgaaatgaatttgcgagattctccaag
ttcatgaccaacgtccgaaccggtgtgttctacggtggtacccccatctctgccgatcaa
gaaatcttagcctcaaaggagaaatgtccacacatcgtcgtgggaactccaggtagaacg
atggctttggtcagggataagaaactcaacgcgacaaaggtcaaacactttgtattggac
gagtgtgataagatgctagaaacacttgacatgcgaagagatgttcaagagatcttccga
gctacaccccaccacaaacaagttatgatgttctccgccaccctgtccaaagacatccga
accacttgtaagaagttcatgcaaagtcctctggaaatttacgtcgatgacgagaccaaa
ttgaccctccacggtcttcagcaatacttcctcaagctcgaggagaaggagaagaacagg
aaactcaacgacttgctcgataacctcgagttcaaccaggtctgtatctttgtcaaatct
gttgcccgagccactcaactcgacgcgttattgcaagaatgtaatttcccatctatttgt
atccactctgctcttcctcaacaagaacgtatctcacgattccagcaattcaaagccttc
gagaaacgtatcctggtagctacggatattttcggtcgaggtatcgacgttgaacgagtc
aacgtagttatcaactatgatgcccctgctgatgctgattcgtacctccatcgagttggt
agagcaggtcgattcggtaccaaaggtttagccatctcgttcgtatcttccgatggtgat
tccgaagtgcttcaaaagattcaagagagattcaccgttgccattcctactttacctgag
actattgatcctgccacttatatgacttcttaa
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