Klebsiella michiganensis RC10: VW41_04635
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Entry
VW41_04635 CDS
T03782
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
kmi
Klebsiella michiganensis RC10
Brite
KEGG Orthology (KO) [BR:
kmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kmi03400
]
VW41_04635
DNA repair and recombination proteins [BR:
kmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VW41_04635
Archaeal homologous recombinant proteins
VW41_04635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
nSTAND3
ABC_tran
ABC_ATPase
cobW
AAA_21
Harakiri
MobB
AAA_14
NTPase_1
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AJZ88377
LinkDB
All DBs
Position
complement(990870..994025)
Genome browser
AA seq
1051 aa
AA seq
DB search
MKILSLRLKNINSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGTGYRAFWSQTRARNAANGNLQAPRVELAQIS
DGKILADKIKDKLEIIASLTGLDYDRFTRSMMLSQGQFAAFLNADANDRASLLEELTGTE
IYGTVSAAVFENHKQIKSRLENLLAQASGVALLTAEQQQQLTESLQALTLEEKKLSAEHH
RQQQHQQWLTQRTRLSADKMQKQHALDAANQALKDAEPMLAKLTRALPAEKLRPHWQRLQ
EKQLSLKQNSEAAEKVNTRLQQLFVRRQQTRMLATGQAQRLKSEAQQVEDWLAANDRYRL
WAAELAGWRMAFTQQQRDDKQLAELNQTLEASRQKLQGLPAPKLGLSPDEVSAHLQRMLA
TRPARQLLATLQPQFAALEKRKIEQLRELAELDKSIAECDVELGQKRQQYKDKRQHEADL
EKVVEQEKRIQSLEAERARLQPDSPCPLCGSTQHPAVEAYQALEPGENQQRLAALKQEVA
KLAELGFALKGQLDTRRQQREKLIQASATLQAEEASLSARWQQQCADLAIALTPQDDVSA
WLDEQEQREQQLRQLSDRLALEAQYQRDSQQHEKLNADVMAQRASLQSSLEQAGLQRPEP
GDEQHWLEARQQESQQWQHQQDKLPQLRQQLSALDMLLSTLADDGSTPLPLDEHEHQAAL
QNWQALHNDCNLLEGQRQSLEQQLNHSQAEASAAQAQFSSELSASQFSDEADFRGALLEE
SERLELEQRKQQLERQQHQQTTLLEQAASALAQHLSARPENLHEETDLSVLEAQTASLSL
QLRDNASRQGQIVQQLRHDEENRVRQQALMQEIKACEAQVEDWGYLNALIGSKEGDKFRK
FAQGLTLDNLVWLANNQLNRLHGRYLLQRKDSEALELQVVDTWQADAVRDTRTLSGGESF
LVSLALALALSDLVSHKTRIDSLFLDEGFGTLDAQTLDTALDALDTLNASGKTIGVISHV
EAMKERIPVQIKVKKINGLGVSRLDKAFVVD
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcagccttcggttaaaaaacattaactccctgaaaggcgagtggaaaatt
gatttcacccgggagcctttcgccagcaacgggctgtttgccatcaccggccccacgggc
gcgggcaaaaccaccctgctggacgctatttgcctggcgctttaccacaagacgccgcgc
ctcaacaccgtgtcgcagtcgcaaaacgacctgatgacccgggacacggcggaatgcctg
gccgaagtcgagtttgaggtaaaaggcacgggctaccgcgctttctggagccagacccgc
gcccgcaatgcggcaaacggcaatcttcaggcaccccgcgtggagctggcccaaatcagt
gacggcaaaattctggcggataaaatcaaagacaaactggaaattatcgcctctcttacc
gggctggactacgaccgcttcactcgctcgatgatgctctcccaggggcagttcgccgcc
tttttaaacgccgatgccaacgaccgcgcctcgctgcttgaagagctgaccggcacggag
atttacggcacggtttccgcggcggtctttgaaaatcataagcaaatcaaaagccggctt
gaaaacctgctggctcaggcctccggcgtcgcgctattaaccgcagagcagcaacagcag
cttacagagagtttgcaggcgctcactcttgaagagaaaaagctctccgctgagcatcac
cggcagcagcaacaccagcaatggctcactcagcgtacccggctttcagccgataaaatg
caaaagcagcatgcgctggacgccgccaatcaggctctcaaagacgcagagccaatgctg
gcgaaactcacccgcgccctgcccgccgaaaaacttcgccctcactggcagcggctgcag
gaaaagcagctgtcgctgaagcaaaacagcgaggcggcggagaaagtgaatacccgctta
cagcagcttttcgtccgccggcagcaaacccggatgctggccaccggccaggctcagcgg
ctgaagagtgaagcacagcaggtcgaagactggctcgcggcgaatgaccgctatcgcctt
tgggccgcagaactggcgggctggcgcatggcatttacgcagcagcagcgcgacgacaaa
cagctggctgagctaaaccagacgttagaagccagtcggcaaaagctgcagggactgccg
gcgccaaaactcggcctttctcccgatgaagtgagcgctcatttacagcgaatgctggcg
acccggccagctcgccagctgctggccactttgcagccgcagtttgccgcgcttgagaaa
cgcaaaatcgagcagctgcgcgagcttgccgagctggataaatcaattgcagagtgtgac
gttgaactggggcaaaagcgccaacagtacaaagacaaacgccagcacgaagcggatctg
gaaaaagtcgtcgaacaggaaaagcgcattcaaagccttgaggccgagcgcgcacgcctg
cagcctgattcgccgtgtccgctttgtggctcaacccaacacccagcggtggaggcgtat
caggctctcgagcccggggagaaccaacagcgcctggccgcccttaaacaagaagtggct
aaactcgccgagcttggctttgcccttaagggccagcttgatacccggcgccagcagcgc
gaaaagctgatacaggcaagcgcgacgcttcaggccgaagaagcgtcgctgtcggcccgc
tggcagcaacagtgcgcggacctagctattgcgttaacgcctcaggacgatgtcagcgcc
tggcttgacgagcaggagcagcgcgaacagcagttgcgccagcttagcgaccggctggcg
ctggaggcgcaatatcagcgtgacagccagcagcacgaaaagctgaacgcagacgtcatg
gcgcagcgcgcttcgctacaatcgtcgctggagcaggctggccttcagcgtcctgaaccg
ggcgacgagcaacactggcttgaggctcgccaacaggaatctcagcaatggcagcatcag
caggacaaactgccccagcttcgccagcagctttccgctctcgatatgctgctctcgacc
cttgcggacgatggctccacaccgctgccgctggatgaacatgaacatcaggcggcactg
caaaactggcaggcattgcataacgactgcaacctgctggaagggcagcgccagtcatta
gagcagcagctgaaccacagccaggcggaggccagcgcggcacaggcacagttcagcagt
gagctttcagccagccagttcagtgacgaggccgacttccgcggcgcattgctggaagag
agcgagcgccttgagctggaacagcgtaaacagcagctggaacgccagcagcaccagcag
actacgctgctggaacaggcggcaagtgcgctggctcagcacttatcggcgcggccagaa
aatctgcatgaagaaaccgatctcagcgtgctggaggcgcagacagcctcgctcagcctc
cagttacgtgacaatgcttctcgccagggacaaatcgtccaacagctgcgtcacgacgag
gaaaaccgggtccgccagcaggcgctgatgcaggagataaaagcctgtgaagcgcaggta
gaagactggggctatctcaacgcgcttatcggctccaaagaaggggataaattccgtaag
tttgcccaaggcctgacgctggataacctcgtctggctggcaaacaatcagctcaatcgc
ctgcacgggcgctacctgctgcagcgtaaagacagcgaagcgcttgaattacaggttgtc
gatacctggcaggctgatgcggtgcgtgatacgcgcacgctttccggcggcgaaagcttc
ctggtgagcctggcgctggcgctggcgttatccgatctggtcagccataaaacccgtatt
gattccctgttcctggatgagggttttggcaccctggatgcgcaaacgctggataccgcc
ctcgatgcgctggatacgctgaacgccagcggcaaaaccatcggcgttatcagccacgtt
gaggcaatgaaggagcggatcccggtgcaaatcaaggtgaagaagattaacgggcttggc
gtgagccggctggataaggcttttgtggtggattga
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integrated database retrieval system
