Klebsiella michiganensis RC10: VW41_12085
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Entry
VW41_12085 CDS
T03782
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kmi
Klebsiella michiganensis RC10
Brite
KEGG Orthology (KO) [BR:
kmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmi03016
]
VW41_12085
Enzymes [BR:
kmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
VW41_12085
Transfer RNA biogenesis [BR:
kmi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VW41_12085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
OSR1_C
Motif
Other DBs
NCBI-ProteinID:
AJZ89720
LinkDB
All DBs
Position
2585827..2587761
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDANKSYFIPPPQMKKVMHGDRI
SAVIHTDKDRESAEPETLIEPFLTRFVGRVQKKDDRLSIVPDHPLLRDAIQCRAARGVTH
DFQNGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHLAPWWVTLSRHNLEREAPDGVAT
EMLDDGLVREDLTALDFVTIDSASTEDMDDALYVEELADGKLQLTVAIADPTAWIAEGSK
LDGIAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANVVRPVLACRMTIEQDGAIASDIHF
FAANIESKAKLVYDEVSDWLEEKGGWQPQSEAIASQIRLLHRVCLARSEWRQTHALVFKD
RPDYRFILGEKGEVLDIVAEPRRIANRIVEESMIAANVCAAIVLREKLGFGIYNVHTGFD
PANTEQLAAMLQTHGIAVDAQEVLTLEGFCKLRRELDAQPTGFLDSRIRRYQSFAEIGTE
PGPHFGLGLEAYATWTSPIRKFGDMVNHRLLKAIIKGETAARPAEETTVQMAERRRLNRM
AERDVGDWLYARFLSPKAGTDTRFAAEIIDVSRGGMRVRLVENGAVAFIPAPFIHAVRDE
LVCSQENGTVQIKGEPVYKVTDVIDVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggataacccgctgctcgcgcagctaaaacagcaactgcattcccagactcca
cgcgctgaaggtgtggtgaaaggcacggaaaaagggttcggcttcctcgaagtcgacgcg
aataaaagttactttattccgccgccgcagatgaaaaaagtgatgcacggcgaccgtatc
agcgccgtcattcacaccgataaagaccgtgagtccgccgagccggaaacgcttatcgaa
cctttcctgacgcgttttgttggccgcgttcagaaaaaagacgaccgcctgtcgattgtg
ccggatcacccgctgctgagagacgcgattcagtgccgcgcggcgcgtggcgtgacccat
gacttccagaacggtgactgggcggtggctgaaatgcgccgtcatcccctgaagggcgac
cgcggtttttacgctgaattaactcaattcatcaccttcggcgacgatcatctcgcgccg
tggtgggtgacactgtcacgtcacaatcttgaacgtgaagcgccggacggcgtggccacc
gagatgctcgacgatgggctggtgcgtgaagacttaacggcgctggattttgttaccatt
gacagcgccagcaccgaagacatggacgatgcgctgtacgttgaagaacttgccgacggc
aaactgcagcttaccgtagctatcgccgatccgacggcgtggatcgctgaaggcagcaag
ctcgacggcatcgccaaagttcgtgcctttaccaactatctgcctggcttcaacattcca
atgctgccgcgcgagctgtccgacgacctctgctccctgcgcgccaacgttgtccgccct
gtcctcgcctgccgtatgaccattgagcaggacggcgcaatcgccagcgacattcatttc
tttgccgcgaatatcgagtctaaagccaagctggtttatgacgaagtgtctgactggctg
gaagagaaaggtggctggcagccacagagcgaagccattgccagccaaattcggctgctg
catcgcgtgtgcctggcccggagcgaatggcgccagacccatgcgctggtctttaaagat
cgcccggactaccgctttattttgggcgagaaaggcgaagtgctggatatcgtagccgag
ccgcgtcggatcgcaaaccgcatcgtggaagagtcgatgattgcggctaacgtttgtgcg
gccatcgtgctgcgcgagaagctcggcttcgggatttataacgttcataccggctttgat
cccgccaataccgaacagctggcagccatgctgcaaacccacggcatcgcggtggacgca
caggaagtgctgacgctggagggcttctgcaagctgcgccgcgaactggatgctcagcca
accggtttcctcgacagccgcatccgtcgttaccagtcctttgccgagatcggcaccgaa
ccaggtccgcacttcggtcttggcctggaagcctatgccacctggacttccccgatccgt
aaattcggcgatatggttaaccaccgtttgctgaaagctatcattaaaggcgaaactgcg
gctcgtccggcggaagaaaccaccgtccagatggcagaacgccgccgcctgaatcgaatg
gccgaacgtgatgtgggcgactggctgtatgcccgcttcctgagcccgaaagcaggcacc
gatactcgctttgcagcagaaattatcgatgtcagccgcggcgggatgcgcgttcgcctg
gttgaaaacggggccgtggcgtttatcccggcaccattcatccacgcggtgcgtgatgaa
ctggtttgcagccaggagaacggcaccgtgcagatcaagggtgagccggtttataaagta
accgacgttatcgatgtgactatcgcggaagtccgcatggaaacgcgcagcgttatcgct
cgtcctgcggcctga
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