Klebsiella michiganensis RC10: VW41_12180
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Entry
VW41_12180 CDS
T03782
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kmi
Klebsiella michiganensis RC10
Brite
KEGG Orthology (KO) [BR:
kmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kmi03032
]
VW41_12180
03400 DNA repair and recombination proteins [BR:
kmi03400
]
VW41_12180
Enzymes [BR:
kmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
VW41_12180
DNA replication proteins [BR:
kmi03032
]
Prokaryotic type
DNA Topoisomerases
VW41_12180
DNA repair and recombination proteins [BR:
kmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VW41_12180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF3700
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AJZ89738
LinkDB
All DBs
Position
complement(2607860..2610457)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSTTKKSADSAAAKGTKKVK
KDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVSELKSLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDTRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEIDANLSTPKGDALPVQVSH
HKDKPFRPVNREQTMAAVSLLEKARYTVLDREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVSMVRGYIEENFGKKYLPADANQYASKDN
SQEAHEAIRPSDVTVLAEALKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVEAGEY
RLKARGRTLRFDGWTKVMPALRKGDEDRTLPAVDPGESLTLVELLPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMEDSLDRVANNQAEWKGVLDNFFTDFSGQLEKAEQEPEEGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
RMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELHRFRDRLPEKLRYLADAPQEDPDGNKAFVRFSRKTKQQYV
ASDKDGKATGWSAFFVDGKWVVGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtcatcgttgagtccccggcaaaagccaaaacgatcaacaaatat
ctcggaaatgactacgtggtgaagtccagcgtcggtcatatccgtgatttgccgaccagt
ggatcaaccaccaagaagagcgctgactctgccgccgccaaagggaccaaaaaggtcaaa
aaggatgaacgcggagcgctcgtcaaccgtatgggtgtcgatccctggcataactgggat
gctcattacgaagtgctgccgggcaaggagaaagtggtctccgagctgaaatcactggca
gaaaaagcagaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaagttatcggtggcgacgacactcgctacagccgcgtagtgtttaac
gaaattactaagaatgcgattcgccaggcgtttgaaaagccgggtgaactgaacattgat
cgtgtgaacgcccagcaggcgcgccgctttatggaccgcgttgtgggctacatggtgtct
ccgctgctgtggaaaaagattgcgcgtggcctgtctgccgggcgcgttcagtccgtggcg
gttcgccttgtggttgagcgtgaacgcgaaattaaagcttttgtcccggaagagtactgg
gaaatcgacgccaatctgtcgacgccgaagggcgatgcgctgccggtgcaggtgagtcat
cataaagacaagcctttccgtccggttaaccgcgagcagaccatggcggccgttagcctg
cttgaaaaagcacgctataccgttctggatcgcgaagacaagccaaccagcagcaagcct
ggcgcgccgttcattacgtccacgctgcagcaagccgccagtactcgccttggcttcggc
gtgaagaaaaccatgatgatggcacagcgtctgtacgaagcgggctacattacctacatg
cgtaccgactctactaacctgagtcaggatgcggtgagcatggttcgcggctatatcgaa
gagaacttcggtaagaaatatctgccggcggacgctaatcaatacgccagtaaggataac
tctcaggaagcgcacgaagcgattcgtccttctgatgtgaccgtgttggcggaagcgtta
aaagacatggaagcggatgcccagaagctttatcagctgatctggcgccagtttgttgcc
tgtcagatgacacccgcgaaatacgattccaccacgctgacggtagaagccggtgagtac
cgcctgaaggcgcgaggccgcacgctgcgttttgatggctggacgaaagtgatgcctgcg
ctgcgcaagggcgacgaagatcgtaccttaccggcggtggatccaggcgagtctctgacg
ctggttgaattgcttccggcccagcactttaccaagccacctgcgcgtttcagcgaagcg
tcgctggtgaaggaactggaaaaacgcggtatcggccgcccatccacctatgcttctatc
atttcgaccattcaggatcgtggctacgtgcgcgttgagaaccgccgtttctacgctgaa
aaaatgggtgaaattgttaccgatcgtctggaagaaaacttccgcgaactgatgaattat
gacttcacggcgcagatggaagacagcctggaccgggtggcaaataatcaggccgagtgg
aaaggggtgctggacaacttcttcactgattttagcggccagcttgagaaagctgagcag
gagccggaagaaggcggcatgcgcccgaaccagatggttctgaccagcatcgactgccca
acctgcggccgtaaaatggggattcgtaccgcgagtaccggcgtattcctcggctgttct
ggctatgcgttaccgccgaaagagcgctgcaaaaccaccatcaacctggtgcctgagaac
gaagttcttaacgtgctggaaggtgatgatgcggaaaccaacgctctgcgcgccaagcgc
cgctgccagaagtgcggcacggcgatggacagctacctcatcgatccgaagcgtaagctg
cacgtctgcggtaacaacccgacctgtgacggctacgaaatcgaagagggcgaattccgg
atcaagggttatgacggcccaatcgttgagtgcgagaagtgtggctcagaaatgcacctg
agaatggggcgttttggcaagtacatggcctgtaccaacgatgagtgtaaaaacacccgt
aagatcctgcgtaacggcgaagtcgcgccaccgaaggaagatccggtgcctctgccggag
ctgccgtgtgagaaatcggacgcctatttcgtgctgcgtgatggtgccgccggcgtcttc
ctggccgcgaacacgttcccgaaatctcgtgaaacgcgtgccccgctggtggaagaactg
caccgcttccgcgatcgtctgccggagaagctgcgttacctggccgacgcccctcaggaa
gatcctgacggtaacaaagcgtttgtccgctttagtcgtaaaacgaagcaacagtatgtt
gcttccgataaagacggcaaagcgaccggctggtcagccttcttcgttgacggcaagtgg
gtcgtgggcaagaaataa
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