Klebsiella michiganensis RC10: VW41_17825
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Entry
VW41_17825 CDS
T03782
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kmi
Klebsiella michiganensis RC10
Pathway
kmi03420
Nucleotide excision repair
kmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VW41_17825 (uvrD)
03430 Mismatch repair
VW41_17825 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kmi03400
]
VW41_17825 (uvrD)
Enzymes [BR:
kmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VW41_17825 (uvrD)
DNA repair and recombination proteins [BR:
kmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VW41_17825 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
VW41_17825 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
AJZ90750
LinkDB
All DBs
Position
complement(3863239..3865401)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAATRSNMLVLAGAGSGKTRVLVHRIAWLMTVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGKKDEGLRPHHVESYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNSIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTNNILNAANALIANN
SGRLGKELWTDGSDGEPISIYCAFNELDEARFVVNRIKTWQENGGALEQCAILYRSNAQS
RVLEEALLQGSMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDQQLTLWQSCRLLLQEKALAGRAASALQRFMELIDALAHETADMPLHVQ
TDRVIKDSGLFMMYEQEKGEKGQTRIENLEELVTATRQFSYNDEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEAYHRPSRFIGELPENCVEEVRLRASISRPVSHQRMG
TPIAQNDSGFSLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagcctcaacgacaaacagcgcgaagcggttgccgcc
acgcgcagcaatatgctggtgctggccggggcgggcagtggtaagactcgcgtgcttgtg
catcgcattgcgtggttgatgacggtcgaaaactgctctccatactccatcatggcggtg
acctttaccaataaagcggcggcggaaatgcgccaccgtattggtcaactgatgggcacc
agccagggcggcatgtgggttggcaccttccacggcctggctcaccgcctgttgcgtgcg
caccatatggacgccaacctgccgcaggactttcaaattctcgacagcgaagatcagctt
cgcctgctgaaacgcctgattaaagcgatgaacctggacgagaagcagtggccgcctcgc
caggcgatgtggtacatcaacggcaaaaaagacgaaggcctgcgcccgcatcacgttgaa
agctacggtaacccggtggagcaaacctggcagaaggtataccaggcctatcaggaggcg
tgcgatcgcgccgggctggttgacttcgccgagcttctgctgcgcgcccacgaactgtgg
ctgaacaagccgcatatcctgaaccattaccgcgaacgcttcaccaacatcctggtggac
gaattccaggacaccaacagcattcagtatgcgtggatccgcctgctggccggtgatacc
ggcaaagtgatgatcgtgggcgatgatgaccagtcgatctacggctggcgcggggctcag
gtggaaaatattcagcgcttcctgaacgacttcccgggggcgcaaactatacgcctggag
caaaactaccgctcgacgaacaacattctgaatgcggccaacgccctgatcgccaataac
tctggccgcctcggcaaagagctgtggaccgacggcagcgacggcgaaccaatctcgatt
tactgcgccttcaacgagctggacgaagcccgtttcgtggtcaatcgtattaaaacctgg
caggaaaacggcggcgcgctggaacaatgcgccattctgtatcgcagcaacgcccagtcg
cgcgtgctcgaagaggcgctgctgcagggcagtatgccgtaccgtatttacggcggtatg
cgcttcttcgaacgccaggaaatcaaagatgcactctcctatttgcgcctgatagccaac
cgcaatgatgatgcggcctttgaacgcgtggtgaatacgccaacccgcgggataggcgat
cgcacgctcgacgttgtacgccagaccgcgcgcgaccagcagctaacgctgtggcaatct
tgccgcctgctgctgcaggaaaaagcgctggccggtcgtgcggcgtcggcccttcagcgc
tttatggagttgattgacgccctcgcccatgaaacggcggatatgccgctgcacgtccag
accgatcgggtgattaaagattccgggctgttcatgatgtatgagcaggaaaaaggcgag
aaaggccagacccgcattgaaaacttagaagaactggtgacggccacgcggcagttcagc
tacaacgacgaagacgaagatttgatgccgctgcaggcgtttctctcgcatgcggcgctg
gaagcaggtgaagggcaggcagatacctggcaggatgcggtgcagctgatgacgctgcac
tcggcaaaaggcctggagttcccgcaggtgtttatcgtggggatggaagaaggcatgttc
ccaagccagatgtctctcgacgaaggcgggcgcctggaagaagagcgccgtctggcatac
gtgggggtgacccgggcgatgcaaaagttgacgctgacctatgcggaaacgcgccgcctg
tatggcaaagaagcctatcatcgcccgtcacgctttatcggtgagctgccagaaaactgc
gtggaagaggttcgcctgcgcgcaagtattagccggccggtcagccatcagcgtatgggc
acacctatcgcacagaacgattctggcttcagcctggggcagcgcgtacgtcatcctaag
ttcggcgaaggaaccatcgtgaatctggaaggcagcggggagcacagccgcctgcaggtg
gcgtttcaggggcagggaataaagtggttagtcgccgcttatgcgcgtctggaaacagtg
taa
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