Klebsiella michiganensis RC10: VW41_18445
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Entry
VW41_18445 CDS
T03782
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kmi
Klebsiella michiganensis RC10
Pathway
kmi03420
Nucleotide excision repair
kmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VW41_18445
03430 Mismatch repair
VW41_18445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kmi03400
]
VW41_18445
Enzymes [BR:
kmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VW41_18445
DNA repair and recombination proteins [BR:
kmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VW41_18445
MMR (mismatch excision repair)
Other MMR factors
VW41_18445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_11
Transposase_31
Motif
Other DBs
NCBI-ProteinID:
AJZ90849
LinkDB
All DBs
Position
complement(4003058..4004809)
Genome browser
AA seq
583 aa
AA seq
DB search
MPYRNLTSEQMDAVKFNGNLLLTACPGSGKTKTLVSKLCFILENKELFCIGKKKIIALTY
TNIAADTILERIMSFGISSESLWIGTIHSFCLNWIIKPNLDKIPRLCRGFSVIDEHEKEF
LINELKEKHGLSANDKVFTNLDFNLGQFYSRGTKEHLIVKEYHNHLYEKKLIDFDLILNL
TCRVLTKYNALCERLSLLLRCILVDEYQDTSLIQYEILRQIVLKKNTMITFIGDKEQAIY
TGLGAVVKNRDELIDCFQLDNLTEMKLTGCFRSSQSIVDFYSKYKDEDYEINSLSDNKDF
NSVIFKESEVDVSQLPIYVSGIIRTHLAQGVLPNEIAILCPGWFDVIKLSNDIVTLNPDI
EIDGVMISPIPKNNENIWLALVKLFLIRRVPSNFNTRQKLLRDFLQELNVAAPYTESLSP
KKILKIINKISLSVDYNCEIDVWLREVITRFCHSINLSISNDSYYYQEMELLINATLKRM
LKYNMAYKANELHLFFNFRSGVKITTCHSTKGDEYEVVICTGLLNGKIPNWNDIINCSSE
HQNYVARRLLYVVSSRAKKHLYMISERGYKTKRGYPYQTTPQL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgccatatagaaatttaacttctgagcaaatggatgccgttaaattcaacgggaattta
ttattaacggcatgtccagggtcgggtaaaacaaaaacattggtttctaaactttgtttc
attttagaaaataaagaactattttgtataggtaaaaagaagataattgctcttacatat
acaaatatagcagccgatacgattcttgaacggattatgtcattcggcataagtagtgaa
tcgttatggattggaacaatacacagtttttgtttgaattggattataaaacctaattta
gataagataccaagactttgccgaggatttagtgtaattgatgaacatgaaaaggaattt
ctcataaatgaattaaaagaaaaacatggcctatctgcaaatgataaagtttttactaat
ttagattttaaccttggtcagttttattcccgtgggaccaaagaacatttgattgtaaaa
gaatatcataatcatttgtatgagaaaaaattaatcgattttgatttgatattaaatctg
acttgtcgagtgttgacaaaatacaatgcactttgtgaaagattgtctttacttttaagg
tgtattttagtcgatgagtatcaagatacatctcttatacaatatgagatactcagacaa
attgtattaaagaaaaatacaatgattacttttattggggataaagagcaagctatatat
actggtttgggggctgtcgtaaagaatagagatgaattaattgattgtttccaacttgat
aatctaaccgagatgaaattaacggggtgtttccgtagtagccaatctattgttgatttt
tatagtaaatacaaagacgaagattatgagattaattcactttcagataataaggatttc
aactcagtaatttttaaagaaagcgaggtggatgtttctcaactgccgatttatgtatca
ggtattattagaactcatttggctcagggagtacttccaaatgaaattgctattctgtgt
cctggttggtttgatgtgataaaactttcaaatgatattgttactcttaatccggatata
gaaattgatggagtcatgatctctcctatacctaaaaacaatgagaatatttggcttgct
ttagttaaactatttttaattaggagagttccctctaattttaatactagacagaagcta
ttgcgggatttccttcaagaattaaatgttgctgcaccctatactgaatcgttgtctcct
aaaaaaatattgaagattattaataaaatatcattatctgtggattataattgtgaaatt
gatgtttggttgagagaggttataacgagattttgccattctattaatttgagcataagt
aatgatagctactattatcaagaaatggaacttttgattaatgccacattgaaaagaatg
ttaaagtataatatggcttataaagcaaatgaattacatttgtttttcaattttagaagc
ggtgttaaaatcacaacttgtcattcgacaaaaggtgatgagtatgaagtggtcatttgc
actggattactaaatgggaaaatacctaattggaatgatattataaattgtagctcagag
catcaaaattatgttgcccgtagacttttatatgttgtttcttcgcgtgcaaagaaacat
ttatatatgatatcagagagaggttacaagacaaaaaggggatatccatatcagacaact
ccacagctttga
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