Kaustia mangrovi: HW532_00560
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Entry
HW532_00560 CDS
T07196
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kmn
Kaustia mangrovi
Pathway
kmn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kmn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HW532_00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmn03021
]
HW532_00560
03400 DNA repair and recombination proteins [BR:
kmn03400
]
HW532_00560
Enzymes [BR:
kmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HW532_00560
Transcription machinery [BR:
kmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HW532_00560
DNA repair and recombination proteins [BR:
kmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HW532_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
QPC41364
UniProt:
A0A7S8C0W5
LinkDB
All DBs
Position
93795..94814
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AA seq
339 aa
AA seq
DB search
MIHKNWQDLIKPNKLDITPGRDPKRVAVVVAEPLERGFGLTLGNALRRVLLSSLQGAAVT
SVQIDGVLHEFSSIAGVREDVTDIVLNIKEIALAMHAEGPKRLLLKKEGPGVVTAGDIEE
IADVEILNPEHVICTLDEDAEIRMEFTVDTGKGYVAADRNRPEDAPIGLIPVDSLYSPVK
RVSYRVENTREGQILDYDKLTMTVETDGSVKPDDAVAYAARILQDQLQIFINFEEPTKVV
EEDKQAAELPFNAALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVPNWPPENIEELAKKYENQY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgattcacaagaactggcaggatctgatcaagccgaacaagctcgatatcacgccaggg
cgcgatcccaagcgggtcgccgtggtggtggccgagccgctcgagcgtggcttcggtctc
acccttggcaatgcgctgaggcgggtgctcctgtcgtcgctgcagggcgcggccgtcacc
tcggtgcagatcgacggcgttctccacgagttctcctcgattgccggcgtgcgcgaggac
gtgaccgacatcgtcctcaacatcaaggaaatcgcgcttgccatgcatgcggagggcccc
aagcgcctgctcctgaagaaggaggggccgggcgtggtcaccgccggcgacatcgaggag
atcgccgatgtggagattctcaatcccgagcatgtgatctgcacgctcgacgaggatgcc
gagatccgcatggagttcaccgtcgacaccggcaagggctatgtcgccgccgaccgcaac
cggccggaggacgcgcccatcggtctcatcccggtggacagcctctacagccccgtcaag
cgggtctcctaccgggtggagaacacccgcgagggccagatcctcgactatgacaagctc
accatgacggtggagacggacgggtccgtcaagccggacgacgcagtggcctatgccgcg
cgcatcctgcaggaccagctccagatcttcatcaatttcgaggagccgaccaaggtcgtc
gaggaggacaagcaggccgccgagctgccgttcaacgccgcgctcctgaagaaggtggac
gagctggagctgtcggtgcgttcggccaactgcctgaagaacgacaatatcgtctatatc
ggcgatctcattcagaagaccgaggcggagatgctgcgcacgccgaatttcggccgcaag
tcgctgaacgagatcaaggaggtgctggcgcagatgggcctgcatctcggcatggaggtt
ccgaactggccgcccgagaatatcgaggagctggccaagaagtacgagaaccagtactga
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