Kaustia mangrovi: HW532_11600
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Entry
HW532_11600 CDS
T07196
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kmn
Kaustia mangrovi
Pathway
kmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HW532_11600 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmn03019
]
HW532_11600 (recQ)
03400 DNA repair and recombination proteins [BR:
kmn03400
]
HW532_11600 (recQ)
Enzymes [BR:
kmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HW532_11600 (recQ)
Messenger RNA biogenesis [BR:
kmn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HW532_11600 (recQ)
DNA repair and recombination proteins [BR:
kmn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HW532_11600 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QPC43281
UniProt:
A0A7S8C4P7
LinkDB
All DBs
Position
complement(2513984..2515834)
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AA seq
616 aa
AA seq
DB search
MPDLTAAQHVLRTTFGFDAFRPGQAEIVEAVLAGEDVLAVMPTGSGKSLCYQLPALMGDG
LTLVVSPLISLMRNQVAQLSAYGIQAASLNSTNDPAENRDILDRIDAGALKLLYIAPERL
AKSDTLNRLARAGISLLAVDEAHCISQWGHDFRPEYLTLGTIRQSLPELRIVALTATADK
ATRADIQEKLFPATPRVFVHGFDRPNLSLAMRAKSSARKQIAAFVKAHRGQSGIVYCNSR
RQTEDLAEALTAAGTPTLHYHAGMDPELRNRHQERFLQEDGVVIAATVAFGMGIDKPDVR
FVAHAGLPKNIESYYQEIGRAGRDGLPADTLALYGLDDIRLRRTQIEDSDASPEQKRVEK
QRLNALVALCEAPRCRRQTLLAYFGETAEPCGNCDLCIDGVEVIDGTIAAQKALSAMVRT
GERFGTEHLVNILCGEETEAIAKFGHDRLPTFGVGREHSRNEWRSIFRQLYAAGVISLDI
AGYGRWEMTALGRDILKGQAGLELRKDRLRPAREKADRSASRASAPVLDEADEPLFSALK
SLRTEIARERGVPAYVIFPDRTLIDLAQRKPRSMGALDGVYGIGEAKREQYGRQFLDAIA
EALGDGAAPEGSRAAS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacctgaccgccgcgcagcatgtcctgcgtaccacattcggcttcgacgccttc
cgccccggacaggcggagatcgtggaggcggtgctggccggagaggacgttctcgccgtc
atgccgacgggcagcggcaagtcgctgtgctaccagctcccggccctcatgggcgacggg
ctgacgctcgtcgtctcgccgctcatctcgctgatgcgcaaccaggtcgcccagctctcc
gcctacggcatccaggcggcgagcctcaattccaccaacgatccggcggagaaccgcgac
atcctggaccggatcgatgcgggcgcgctcaagctcctctatatcgcgccggaacggctg
gccaagtcggacaccctcaaccggctggcccgcgccgggatctcgctgctggccgtcgac
gaggcccattgcatctcgcaatgggggcacgatttccggcctgagtatctgacactcggc
accatccgccagtccttgccggagcttcgcatcgtcgcgctgaccgcgacggcggacaag
gcgacgcgcgccgatatccaggagaagctcttcccggccacgccccgggtgttcgtgcac
ggtttcgaccggccgaacctgtcgctcgccatgcgcgccaaatcctccgcgcgcaagcag
atcgccgccttcgtcaaggcccatcgcggccagagcggcatcgtctattgcaattccagg
cgccagacggaggatctcgccgaggcgctgaccgccgccggcacgcctacgctccactat
cacgccggaatggatccggagctgcgcaaccgccaccaggagcgcttcctgcaggaggac
ggcgtggtgatcgccgcgaccgtcgccttcggcatggggatcgacaagccggatgtccgc
ttcgtggcccatgcgggcctgccgaagaatatcgagagctattatcaggagatcgggcgc
gcgggccgcgacggcctgcccgccgacacgctcgcgctctacggactcgacgatatccgc
ctgcgccgtacgcagatcgaggacagcgatgcctcgcccgagcagaagcgcgtggagaag
cagcgcctcaacgcgcttgtcgcgctgtgcgaggcgccgcgctgccgccgccagaccctg
ctcgcctatttcggcgagacggcggagccgtgcggcaattgcgacctgtgcatcgacggc
gtggaggtgatcgacggcacgatcgccgcccagaaggcgctgtccgccatggtgcgcacg
ggcgagcgcttcggcaccgagcacctcgtcaacatcctgtgcggggaggagaccgaggcc
atcgccaagttcggccatgaccgcctgccgaccttcggcgtcgggcgggagcactccagg
aacgagtggcgctcgatcttccgccagctctacgccgcgggcgtcatatcgctcgacatt
gcgggctacggtcgctgggagatgaccgcgctcgggcgcgacattctcaagggccaggcg
ggtctggagctgcgcaaggacaggctccggcccgcgcgcgagaaggcggaccggtcggca
tcgcgcgcctccgcccccgttctggacgaggcggacgagccgctgttctccgcgctgaaa
agcctgcgcacggagatcgcgcgcgaacgcggcgtgcccgcctatgtcatcttccccgac
cgcaccctgatcgacctggcccagcgcaagccgcgctccatgggcgcgctcgacggcgtc
tacggcatcggcgaggcgaagcgcgagcaatatggccgccagttcctcgacgcgatcgcc
gaggcgctcggcgacggggcggcgccggagggatcgcgcgcggcatcttga
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