Kaustia mangrovi: HW532_15495
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Entry
HW532_15495 CDS
T07196
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
kmn
Kaustia mangrovi
Brite
KEGG Orthology (KO) [BR:
kmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmn03021
]
HW532_15495 (rpoH)
Transcription machinery [BR:
kmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HW532_15495 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
Sigma70_r4_2
HTH_11
HTH_3
GntR
wHTH-HSP90_Na-assoc
KORA
PgaD
Motif
Other DBs
NCBI-ProteinID:
QPC43971
UniProt:
A0A7S8C615
LinkDB
All DBs
Position
complement(3340795..3341721)
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AA seq
308 aa
AA seq
DB search
MTKQTLPTVTSEGGLSRYLQEIRRFPMLEPGQEYMLAKRWREHEDSDAAHQLVTSHLRLV
AKIAMGYRGYGLPISEIVSEGNVGLMQAVKRFDPDKGFRLATYAMWWIRASIQEFILRSW
SLVKMGTTASQKKLFFNLRKVKGQIQALEDGDLHPDQVAEIATRLGVPADDVVSMNRRLS
GDTSLNAPLRADSDGEWQDWLVDEAESQEARLAASEEYEIRHEYLIKAMKKLNEREKRIF
EARRLSEDPLTLEELSKEFGVSRERIRQIEVRAFEKIQKAVKAEAQKAMASTGNSSGGAG
GEPLATPA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcagacattgccgaccgtgacaagcgaaggcggcctcagccgctacctgcag
gagatccggcgctttccgatgctggaaccggggcaggaatacatgcttgccaagaggtgg
cgcgagcacgaggacagcgacgctgcccatcagctcgtgaccagtcacctgaggctcgtc
gccaagatcgccatgggctatcgcggctacggtctgccgatctctgagatcgtgtcggag
ggcaatgtcggcttgatgcaggccgtcaagcgcttcgatccggacaagggattccggctg
gccacctatgccatgtggtggatccgtgcctcgatccaggagttcatcctgcgctcctgg
agcctcgtgaagatgggcaccacggcgagccagaagaagctgttcttcaacctgcgcaag
gtgaagggccagatccaggcgctggaggacggcgacctccatcccgaccaggtggccgag
atcgccacgcgacttggcgtgccggccgacgacgtggtctccatgaaccggcgcctgtcc
ggcgacacctcgctcaacgccccgctgcgggcggattccgacggcgagtggcaggactgg
ttggtcgacgaggcagagagccaggaagcgcgcctcgccgcgtcggaggagtacgagatt
cgccatgagtatctgatcaaggcgatgaagaagctcaatgagcgcgagaagcggatcttc
gaggcgcgccgcctgtcggaggatccgctgacgctggaggagctgtcgaaggaattcggc
gtctctcgcgagcgcatccgccagatcgaggtgcgtgccttcgagaagatccagaaggcc
gtcaaggcggaagcccagaaggcgatggcgagcacgggcaacagttccggcggtgccgga
ggcgagcctctcgcgacgcctgcctga
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