Kaustia mangrovi: HW532_19695
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Entry
HW532_19695 CDS
T07196
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kmn
Kaustia mangrovi
Brite
KEGG Orthology (KO) [BR:
kmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmn03016
]
HW532_19695 (rnd)
Enzymes [BR:
kmn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HW532_19695 (rnd)
Transfer RNA biogenesis [BR:
kmn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HW532_19695 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QPC44726
UniProt:
A0A7S8C7B5
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All DBs
Position
complement(4166154..4167332)
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AA seq
392 aa
AA seq
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MNIITNTEQLDIVCAELAREPFVAVDTEFMRETTYWPNLCLIQMAGESHEVIVDPLADGI
DLGPFFRLMADEGVVKVFHSARQDLEIVYQRGDVIPAPLFDTQIAAMVCGFGEQIGYENI
VRKLAGAQIDKTSRFTDWSRRPLSDKQLKYAISDVTHLRTVYRKLKTELEQSGRAPWLKE
EMATLTSPDTYRAEPAEAWRRLKFRARNKKALGVFIEVAAWREREAQERNVPRNRILKDD
ALSEIAVHAPADAASLRQLRAVPRGFADSRHADRLIRAIEEGRARDPSSLPDVADDRGGP
RENVGVLGDVLKLALKVVCEREGVAAKIIASAAELEMLAADDNADIPALKGWRRQLFGET
ALALKHGKLAIVIDGKRPRIVARDETYAEAAE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcattacaaatacagaacaactcgatatcgtctgcgcggaactggcgcgcgag
ccctttgtcgctgtcgacacggagttcatgcgcgagacgacctattggcccaatctctgc
ctgatccagatggccggcgagagccacgaggtgatcgtcgacccgctcgccgacggcatc
gatctcggccccttcttccgactgatggcggatgagggcgtggtcaaggtcttccattcc
gcccgccaggacctggagatcgtctatcagcgcggcgacgtgatcccggcaccgctcttc
gacacgcagatcgccgccatggtctgcggcttcggcgagcagatcggctacgagaacatc
gtgcgcaagctggccggcgcgcagatcgacaagacctcccgtttcaccgactggagccgg
cggccgctgagcgacaagcagctcaaatacgccatttccgacgtgacgcatctgcgcacc
gtctacaggaagctgaagacggagctcgagcagtccggccgcgctccctggctgaaggag
gagatggccaccctcacctcgcccgacacctaccgcgccgaacccgccgaggcctggcgg
cggctgaagttccgtgcccgcaacaagaaggcgctcggcgtcttcatcgaggtcgccgca
tggcgcgagcgcgaggcgcaggagcgcaacgtgccgcgcaaccgcatcctcaaggacgac
gcgctgtcggagatcgcggtgcatgccccggcggatgccgcatcccttcgccagcttcgc
gccgtgccgcgcggcttcgccgacagccgccatgccgaccggcttatcagggccatcgag
gagggccgcgcgcgcgatccctccagcctgccggacgtcgccgacgaccgggggggcccg
cgcgagaatgtcggcgtgctcggcgatgtgctgaagctcgccctcaaggtcgtgtgcgag
cgcgagggcgtcgccgccaagatcatcgcgtcggcagccgagcttgagatgctcgccgcc
gacgacaacgccgatatccccgcgctgaagggctggcgccgccagctcttcggggagacc
gcgctcgccctcaagcacggcaagctcgccatcgtcatcgacggcaagcgcccgcggatc
gtcgcgcgcgacgagacctatgcggaggccgcggagtag
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