Kaustia mangrovi: HW532_19810
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Entry
HW532_19810 CDS
T07196
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
kmn
Kaustia mangrovi
Pathway
kmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HW532_19810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmn03019
]
HW532_19810
03009 Ribosome biogenesis [BR:
kmn03009
]
HW532_19810
Enzymes [BR:
kmn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
HW532_19810
Messenger RNA biogenesis [BR:
kmn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HW532_19810
Ribosome biogenesis [BR:
kmn03009
]
Prokaryotic type
rRNA processing factors
HW532_19810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QPC44747
UniProt:
A0A7S8C7E9
LinkDB
All DBs
Position
complement(4194498..4197317)
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AA seq
939 aa
AA seq
DB search
MGTKMLLDAAHPEETRVVTLRGNKIEEFDYESASRKQIRGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPMADRQALVEAEANYQKADDEPDEAGSGSRGEADGDGSD
GEDAADEPKGRSRKGGRRKRGASTKADAESVEEDGDNGSSVESVGAEDALEEVPRHQRSV
KRNYKIQEVIKRRQILLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKIT
DASDRRRLKEAAKSMSVPEGMGLIVRTAGANRTKAEIKRDYDYLLRLWENIRDLTLKSTA
PCLIYEEGSLIKRAIRDLYTKDVDTVLVEGDHAYREAKEFMKMLMPSHARHVKAYKEPRP
LFSRYQVEGQLDGLFLPTVTLESGGYIVINQTEALVSIDVNSGKSTREHNIEDTALKTNL
EAAEEVARQLRLRDLAGLIVIDFIDMEEKRNNRSVERRLKESLKHDRARIQVGRISHFGL
LEMSRQRLRVGMLEGSTLMCPHCEGHGFIRSVESCALSVLRGIEEHLLRRHENITVLCDA
EVASYLLNQKRNHVLGLESAYGVSVFIQPGADQKSSQFKIEKAEARNIVPPKPAVAVQID
SAYSDEPEDDETEAETDIEAEAEAEAEDAEARDGGDEDGDRDQDGQKKRRRRRRGRRGGR
RNKTRADEHDEIHGDNREQDEAPAASDSEDADSGETGSRTEQAEEPAVAAAAESAEGAEA
DTVSEEAPAKGRRRSSRSRKPKAETAETADAAEAEAPAPAETPEPADADAAPAEATAEAS
PEEAPAEQADEPAKPARRKRTTKAKSTSAASRKKKAEEAKAGEDETEKPAPKKRTRRTTK
TAAKKAEEAAAEAAPAEAEAAPAEADTTVEPAPAPEAPAPALAEATSPSQEFVAAEAEAD
AEAEPAAAPAQTDTAVAERDEKPAPRRRGWWQRRILGND
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaaagatgctcctcgatgccgcccacccggaagagacccgggtggttaccctg
cgcggcaacaagatcgaggaattcgactacgaatccgcgtcgcgcaagcagataagggga
aatatctatctggcgaaggtgacgcgcgtggagccgtcgctccaggcggcattcgtcgat
tacggcggtaaccggcacgggttcctcgccttcagcgaaatccatcccgactattaccag
atccccatggccgaccggcaggcactggtcgaggccgaggcgaactaccagaaggccgac
gacgagcccgacgaggccggctccggcagcaggggcgaggccgacggcgacgggtccgac
ggcgaggacgccgccgatgagcccaagggccgctcccgcaagggcggccgccgcaagcgc
ggggccagcaccaaggccgatgcggagagcgtcgaggaggatggcgacaacggctcctcc
gtggaatccgtcggcgcggaggacgcgctggaggaggtgccccggcaccagcgctcggtg
aagcgcaactacaagatccaggaagtcatcaagcgacggcagatcctgctcgttcaggtc
gtcaaggaggagcgcggcaacaagggcgcggcgctcaccacctatctgtcgcttgccggg
cgctactgcgtcctgatgccgaacacagcgcgcggcggcggtatttcccgcaagatcacc
gacgcctccgaccggcgccggctgaaggaggccgccaagtcgatgtcggtgccggaaggc
atggggctgatcgtgcgcaccgccggcgccaaccgcaccaaggctgagatcaagcgcgac
tacgactatctcctcaggctgtgggagaacatccgcgacctgacgctcaaatccaccgca
ccctgcctcatctacgaggaaggcagcctcatcaagcgcgccatccgcgacctctacacc
aaggatgtcgacacggtgctcgtggagggcgaccacgcctatcgcgaggccaaggaattc
atgaagatgctcatgccgagccacgcccggcatgtgaaggcctacaaggaaccgcgcccg
ctgttcagccgctatcaggtggaaggccagctcgacgggctgttcctgccgacggtgacg
ctcgaatcgggcggctatatcgtcatcaaccagaccgaggcgctggtctccatcgacgtc
aattccggcaagtcgacgcgcgagcacaatatcgaggataccgcgctgaagaccaatctc
gaggcggcggaagaggttgcccgccagcttcgcctgcgcgacctcgcgggcctcatcgtg
atcgacttcatcgacatggaggagaagcgcaacaaccggtccgtggagcgccgcctcaag
gaatcgctcaagcacgaccgcgcgcgtatccaggtcggtcggatcagccatttcggcctc
ctggagatgtcgcgccagcgtctgcgggtcggcatgctggaaggctccacgctgatgtgc
ccccattgcgaggggcacggcttcatccggtcggtcgaatcctgcgcgctgtcggtgctg
cgcggcatcgaggagcatctcctgcgccgccacgagaacatcacggtgctgtgcgacgcg
gaggtcgcctcctacctgctcaaccagaagcgcaaccatgtgctgggtctggaatccgcc
tatggcgtctccgtcttcatccagcccggcgccgaccagaagtcctcgcagttcaagatc
gagaaggcggaggcgcgcaacatcgtgccgcccaagccggccgtggccgtgcagatcgat
tccgcctattccgacgagcccgaggatgacgagaccgaggccgagaccgacatcgaggcc
gaggccgaggccgaggcggaggacgccgaagcccgcgatggcggcgacgaggatggcgac
cgcgaccaggacggccagaagaagcgccgccggcgccggcgcggccgccgcggcggccgg
cgcaacaagacacgcgccgacgagcatgacgagatccatggcgacaaccgggagcaggac
gaggctccggccgcctccgatagcgaggacgccgatagcggcgaaaccgggtcccgcacg
gaacaggccgaggagcccgctgtcgccgcggccgccgagagtgccgaaggcgcggaggcc
gatacggtgagcgaggaggcgcccgccaagggccgtcgccgcagctcgcggtcgcgcaag
ccgaaggcggagacggcggagacggccgacgccgcagaggccgaagcgccggcccctgcc
gagaccccggagcctgcggatgccgatgccgcccccgccgaggcgacggcggaggcgtct
cccgaggaggctcccgccgaacaggcggacgagccggccaagcccgcgcgccggaagcgg
acgacgaaggcgaagagcacgagcgccgcgtcgcggaagaagaaggccgaggaggccaag
gccggcgaggacgagacggagaagccggccccgaagaagcgcacgcgccgcaccacgaag
acggccgccaagaaggccgaggaggctgcggccgaggccgcccctgccgaggcggaggca
gctcccgcagaggcggacacgacggtggagccggcacccgcgccggaagcgcccgccccc
gccttggccgaagcgacgagcccgtctcaggagttcgtcgcggcagaggcggaggccgac
gccgaggcggagcctgcggctgcgcccgcacagaccgacaccgccgtggcggaaagggac
gagaagcccgcgccgcgccgccggggctggtggcagcgccggatcctgggcaacgattga
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