Kryptolebias marmoratus (mangrove rivulus): 108228377
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Entry
108228377 CDS
T05608
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108228377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108228377
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108228377
Membrane trafficking [BR:
kmr04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108228377
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108228377
Exosomal proteins of other body fluids (saliva and urine)
108228377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
LMBR1
Lzipper-MIP1
GNVR
DUF4658
DUF7269
Protocadherin
ETRAMP
Motif
Other DBs
NCBI-GeneID:
108228377
NCBI-ProteinID:
XP_017259415
LinkDB
All DBs
Position
LG12:complement(637265..656203)
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AA seq
287 aa
AA seq
DB search
MNVGLRMVVGLRMVVGLRMVVGLRMVVGLVEVLRVEEIRGCIEKLSEDVEQVKKQHSAIL
AAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHST
LSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDIK
MDSQMTKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVD
YVERAVSDTKKAVKYQSQARKKKIMIIICCIILGVVLASTIGGTMGF
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgggtctgaggatggttgtgggtctgaggatggttgtgggtctgaggatggtt
gtgggtctgagaatggttgtgggtctggttgaggtcctgcgggtagaggagatcagaggc
tgtatagagaagctgtcggaggatgtggagcaggtcaagaaacagcacagcgccatcctg
gccgccccgaacccggacgaaaagaccaaacaggagttggaggacctcacagctgacatc
aagaagacggctaataaagttcgctcaaaattaaaagcaatcgagcagagcatcgagcag
gaggagggtctcaacagatcatcagcagacctcaggatccgaaagacacagcactcgacg
ctgtcacgtaagtttgtggaggtgatgaccgagtacaacaccacgcagtccaagtaccgc
gaccgctgcaaggaccgcatccagagacagctggagatcactggaagaaccaccaccaac
gaggagctggaggacatgttggagagtggcaaactggccatcttcaccgatgatatcaaa
atggactctcagatgaccaagcaggccctgaacgagatcgagacccgacacaccgagatc
atcaagctggaaaacagcatccgtgagctccacgacatgttcgtcgacatggccatgctg
gtggagagccagggggagatgattgacagaattgagtacaacgtagagcactccgtggat
tacgtggagcgagccgtctccgacaccaagaaggccgtaaaataccagagccaggctcgt
aagaagaagatcatgatcatcatctgctgcatcatcctcggcgtggtcctggcgtcgacc
atcggcggcacgatgggtttctag
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integrated database retrieval system
