Kryptolebias marmoratus (mangrove rivulus): 108228523
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Entry
108228523 CDS
T05608
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108228523
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Other basic domains
RF-X
108228523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Tf2-1_C
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
108228523
NCBI-ProteinID:
XP_017259584
LinkDB
All DBs
Position
LG15:8962693..8977862
Genome browser
AA seq
1400 aa
AA seq
DB search
MPLSFTGPVQSSSEAHPRMANEDPQQPEPGAGSLPGLLPGLLPGLQGAEASALQLRIKNS
ICKSVQSKVENILQDVEKFSDIEKLYLYLKLPSGPSSSAEKSDQSALSSSRTQQMHAFSW
IRDHLEEYPETSLPKQEVYDEYKSFCDNLNYHPLSAADFGKMMKNVFPNMKARRLGMRGK
SKYCYSGLRKRPYVHMPSLPTLDLHKTPDGLHCDMLDSPCQLSGIKEEMRFAACDLVCEW
AQKVLKRQFDAVEDLARFLVDSHYISNKSLAALTIMSGWATEVKAPQTISAFVPTSEAHP
FQPQVTMFSSPSVDAKQQLQRKIQRKQQEQKLHSPLPGDGQAKRVDDCGLCSSPTTPSPQ
PTIGIVVAAVPSPITVQKSRQLMSPSPVGTVESKVLPINFQMVSQPVQAMKPGPKPIQTV
LTSPVGERTARQRYAQILPKPSVTSAITLRSPSTMIIANSPIKTVMTTCHVSPVSLVKMA
AISLAPTSRETTSLTNATLRPASAGVASVVPILTPVAEPGPIVDPQSVDVEMEVEAIHQN
SQMQSSSSQVKTQGANRAGGAGQRAASVPIPQTKGFLGLEETTNTSCSGKSPSGANTVAV
SSNNSSNKTSTLHLSSPSQNNSTVTSVNTSRLSSFEGLQAEEGFLATKSLRKRSGLSPDL
SPVKKVFMSQQPVDGAPGYNIRSMVGYVSSPGTTGRPDSAPVSQDVEMKMSSVLSAQVDT
QSTSSVRASCFDSVAKTLSSALRSNTSIVMETGASVSDALLQEQPEHTAGNGHAANPGFQ
KHTGSNSMTGSLERAQHQTYAQSDPANDALQFLNQASSSQLTAQEHMDYFSFDDDVTQDS
IVEELVQMEEQMKLKQLQQFGNCGSLQGPHALMPDNLTSTNQVMTAFYHTASNNSHLIQT
PTPTSEMMGGAQNFTGESPCSHIASTTPVDSTLGSSRHTPVGTPHSNCSSTVPPSPVECR
NPFAFTPINSSMTCFHDSSPISSSPVKPMQRPMATHPDKARLEWMSNSYSSSGGGGGTLN
KSNSGVGILTGYRGLMDEHFQKPHAFAVPHARHHDGHCGRLTPISPVQQQVASMSKQEGF
AVPAPLDNKTSNTSAATFRCRSVSPAVHQRNLSGNNALPNVPRSVVSPFSSPVTPEMLNI
FSNSKTNPGASSMAQRSRSVPLNIMMQSEVLSAPNQPCSSKNITSVLLNKLEGDNGDTVR
GLGIHNLPSTYTARMNLTQILESKSSLTCTDNQLNLMTPNSTSSCISQRPNYLLESTINE
EMILSAGNSQTQPASGEQHQSLMLALSSQQQQEELQRQQQLDFSSARHLLTGSGLVDQVS
ELTAGGTDFPCEIRMTSELSSSINDLNALDTNLLFDPNQQQSKYECTAAEELFQQMSGAP
HSGGLEWLESKDHPAVGLMG
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttagcttcaccggtccagttcagtccagctcggaagcccacccgcggatggcc
aacgaggatccccagcagccggagcccggggcggggagcctgcccggcctgctgccgggg
ctgctgcccgggctgcagggtgctgaggccagcgctctgcagctccggatcaagaactcc
atctgcaaatctgttcaatcaaaagtagaaaacattctgcaagatgtggagaagttctcg
gacatcgaaaagctctacctctacctcaagttgccttctggtccgagcagctctgcggag
aaaagtgaccagagcgccctgtcatcgagccgcacgcagcagatgcatgcgttcagctgg
atccgggaccatttggaggaatacccggagacctcccttcccaagcaggaggtctacgat
gaatacaagagcttctgcgacaacctgaactaccacccgctcagcgctgcagacttcggg
aagatgatgaaaaacgtcttccccaacatgaaggcgcgccgcctgggcatgagaggaaaa
tccaaatattgctacagtggactaagaaagaggccttatgttcacatgccgtctttgccc
actctggatctccataaaacaccagatggactccactgcgacatgctggactcgccctgc
cagctgagcggcatcaaggaggaaatgcgatttgcagcctgtgatcttgtgtgcgagtgg
gcccagaaggtgctgaagcgccagtttgacgctgtcgaagacttggctcgcttcctggtc
gacagccactacatcagcaacaagtcgctggcagctctcaccataatgagcggctgggca
acagaggtcaaagcacctcagaccatttcagcctttgtccccacgtcagaggctcacccc
tttcagcctcaggtgacgatgttttcgtcgccgtctgtggacgcgaagcagcagctgcag
aggaagattcagaggaagcaacaggagcagaagctgcactctcctttacccggagacgga
caagctaagagggtggatgactgtgggctttgcagcagccccaccacgccctcacctcag
ccaactatcggcattgtggtggcagctgtcccgagtcccatcacggtgcagaagagcagg
cagctgatgtcaccgagtcctgtgggaacagtggagagcaaagttctgcctattaacttc
caaatggtgtcgcagccagttcaggcaatgaagccgggccccaaaccaatccagaccgtt
ctaaccagtccggtgggggagcgcacggctcggcagcgctacgctcagatcctgcccaaa
ccttcagtcacctctgccatcacgctgcgctcgccctccactatgatcatcgccaacagc
cccattaagaccgtgatgactacgtgtcacgtcagcccggtcagtttggtcaagatggca
gcgatatcgctggctcctaccagcagggaaaccacgtcccttacaaacgccacactgcgg
ccggcatccgcaggcgtcgcttctgtggtgcccatcctgaccccggtggctgagcctggg
ccaatcgtcgaccctcagagcgtggatgttgaaatggaagtcgaagctatacatcaaaac
agccagatgcaaagttccagcagtcaagttaagacccaaggagcaaatagggctggaggt
gctggacagcgagccgccagtgtgcccatacctcaaactaaaggcttccttggtctggag
gaaacaaccaacactagctgcagtggaaagtctccatcaggcgccaacactgtggctgta
agcagcaataacagctcaaataaaaccagcactttgcacttatcttctccctctcagaat
aacagcactgttacttcagtaaacaccagcagactatcatcgtttgaaggcctccaagca
gaggaaggttttttagcaacgaagagcctcaggaaacgctcaggcctcagtccagacctt
tcaccagttaaaaaggtttttatgtcccagcagccagtagatggcgctcctggatacaac
atcagaagcatggttggttacgtctccagcccaggtacaacagggaggcctgacagtgcg
ccagtctcacaggatgtggagatgaagatgagctctgtcttgtccgctcaagtcgacaca
caaagcacttcctctgtcagagctagctgcttcgactctgttgccaaaacacttagctcg
gcgctgagaagcaacacttccattgttatggaaactggtgcatcagtcagtgacgcatta
ttacaagaacagccggagcacacggcgggtaacgggcatgccgctaaccctgggtttcaa
aaacacacaggttcaaactcaatgacaggaagcctggaaagagctcaacaccaaacatac
gctcagtccgatcctgctaatgacgccctgcagtttttaaaccaagcgtcatccagtcag
ctcacggcgcaggagcacatggactacttttcctttgatgacgacgtgactcaggacagc
attgtggaggagctggttcagatggaggagcagatgaagcttaaacagctgcagcagttt
ggaaactgtggcagcctccaaggcccgcacgctctgatgccagacaacctaacatccacc
aatcaggtcatgactgctttctatcatactgcgagcaacaacagccacctgatccaaact
cccacacccacatcagagatgatgggaggagcccagaacttcaccggagagagcccctgc
tcccacatcgcctccacaaccccggtggacagcactctgggaagcagccgccacaccccc
gtggggaccccgcactccaactgcagcagcaccgttcccccgagtcccgtggagtgcagg
aaccctttcgcgttcacgcccatcaactccagcatgacctgtttccacgacagcagcccc
atctccagcagccccgtcaaacccatgcagaggccgatggccacccacccagacaaggcg
aggctggagtggatgagtaacagctacagcagcagcggcggcggcggtgggactttaaac
aagtcgaacagcggagtgggaatcctcaccggctaccgaggcctgatggacgagcatttt
cagaagcctcacgcctttgccgttcctcatgcacgccaccacgacggccactgtggccgc
ttgactcccatctcccctgtgcagcagcaggtagccagcatgtccaagcaggagggtttc
gccgtgccggctcctctggacaataaaacctccaacacgtctgctgcaactttccgatgt
cgcagcgtgagcccagcggtgcatcagaggaatctaagtgggaacaacgctctccccaac
gtcccgcgctcggtggtgtctcccttcagttctcctgtaacacctgaaatgttaaacatc
ttttccaacagcaagacaaacccgggggccagcagcatggctcagaggagccgctccgtg
ccgctcaacatcatgatgcagtctgaagtcctgtcggcgccgaaccaaccgtgcagcagc
aaaaacatcaccagtgtccttctgaacaagctcgaaggagacaacggtgacacggtgcga
ggcttaggcattcataatttaccctccacctacacggcacggatgaacctcacccagatc
ctggagtccaagtccagcctcacctgcactgataaccagctgaacctgatgacccctaac
tccaccagcagctgtatctcacagaggccaaattacctcttggaaagcactataaatgaa
gaaatgattctctcagcaggcaacagccaaacccagcctgcctctggagagcagcatcag
tctttaatgttagctttgagctctcagcagcagcaggaagagctacagcggcagcagcag
ttggatttcagcagcgcgcggcacctcctgacaggcagcggcctcgtggatcaggtatct
gagctgactgcaggagggacagacttcccctgcgaaatcagaatgacgtcggagctttcc
agcagcatcaacgacctgaacgcgctggacaccaacctgctgtttgaccccaaccagcag
cagagcaagtatgaatgcactgcggcggaggagctgtttcagcagatgagcggggcgccg
cattcaggcggactcgaatggctggaaagcaaagatcatccagctgtggggctgatgggc
tga
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