Kryptolebias marmoratus (mangrove rivulus): 108228584
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Entry
108228584 CDS
T05608
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010
MAPK signaling pathway
kmr04210
Apoptosis
kmr04218
Cellular senescence
kmr04620
Toll-like receptor signaling pathway
kmr04621
NOD-like receptor signaling pathway
kmr04622
RIG-I-like receptor signaling pathway
kmr04623
Cytosolic DNA-sensing pathway
kmr04625
C-type lectin receptor signaling pathway
kmr04920
Adipocytokine signaling pathway
kmr05132
Salmonella infection
kmr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108228584 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108228584 (nfkb1)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
108228584 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
108228584
NCBI-ProteinID:
XP_017259654
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MAGDDHYLHPSTQMFDNIMMDPSWEFSHFAAMPQTTSLRTVDGPFLQIVEQPKQRGFRFR
YGCEGPSHGGLPGASSEKNKKTYPTVKISNYQGQARVVVQLVTALTSAPQLHAHSLVGKQ
CDKGICIADLQSKDSSISFPNLGILHVTKKNVVKILEERMIEALRMGYNSGLSIHPEIDA
LQGEVRIPRELSDHQRSIISIAAANQAKDMDLSVVRLMFTAFLPDSDGGFSRRLEPVVSE
PIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDDTGLTWEAL
GDFSPTDVHRQFAIVFKTPKYRDQNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKE
EVQRKRQKTLPNFQDFSGHGGGGGGGGGGGGGGLYRGGGPATGGGPGSGGGYYQGLTSYN
YGGGGGGGGFSTGYSAALGGGGGGIKHASNSDAADDGDGSDPDDDPTLGVVLRASAQPGG
LEVGERAEEGGGGVEPEPDR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggccggagacgaccactacctgcatccttccacacagatgtttgacaacataatgatg
gatccttcctgggagttttctcattttgccgccatgcctcagacgacgtctctgcggaca
gtggacggaccgttcctgcagattgtggagcagcccaaacagcgtggcttcaggttcagg
tacggctgcgaggggccgtctcacggcggcctgccgggagcctccagtgagaagaacaag
aagacctaccccaccgtgaagatctctaactaccagggtcaggcccgggtggtggtccag
ctggtgacggcgctgacctccgcccctcagctccacgctcacagcctggtgggaaaacag
tgcgataaaggcatctgcatcgctgacctgcagtccaaagactccagcatcagttttccc
aacctggggatcctccatgtgacgaagaagaacgtggtgaagattctggaggagaggatg
attgaagccctcaggatgggatacaacagcggcctctccatccacccagagatcgacgcc
ctgcagggggaggtccggatcccgcgggaactctccgaccaccaacgcagcatcatcagc
atcgcagcagccaatcaggccaaagacatggacctgagcgtggtccgcctcatgttcacg
gcgttcctccccgacagcgacggaggcttctccaggcggctcgagcccgtggtttctgag
cccatctacgacagcaaggctccgaacgcctccaacctgaagattgtgaggatggatcgg
accgctggctgcgtgaccggaggagaggaggtctacctgctgtgtgacaaagtccagaaa
gatgatattcaggtgcggttttacgaggaggatgatacggggttgacctgggaagctctg
ggagatttctcccccacagacgtccacagacagttcgccatcgtcttcaagactcccaag
tatcgagaccagaacctgcagaagccgacgtccgtgttcgttcagctgaagaggaagtct
gacaatgagaccagcgagcccaaacccttcacctaccatcctcagatcatagataaggag
gaggtgcagaggaaacgtcagaagacattaccaaacttccaggattttagtggtcacgga
ggaggaggaggaggtggaggaggaggaggaggaggaggactgtaccgaggtggaggtcct
gctacaggaggaggtcctggatcaggaggaggatattatcagggcctcacatcctacaac
tatggaggaggaggaggaggaggaggcttttccacagggtactcagctgctctgggagga
ggaggaggaggcatcaagcacgcctccaacagcgacgctgcggacgacggtgacggcagc
gatccagacgacgacccaacgttgggggtcgtcctgcgagcttcagcccagccgggaggc
ctggaggtgggggagagggccgaggagggagggggcggtgtggagcctgaaccagacaga
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integrated database retrieval system
