Kryptolebias marmoratus (mangrove rivulus): 108228646
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Entry
108228646 CDS
T05608
Symbol
si:dkey-206d17.12
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108228646 (si:dkey-206d17.12)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108228646 (si:dkey-206d17.12)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH
zf-CCCH_2
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
108228646
NCBI-ProteinID:
XP_017259723
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Position
LG5:complement(794599..802864)
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AA seq
557 aa
AA seq
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MKADVQPWSKTPATHLDPCGWDSSPCRGPRETMLELNPAPRPLRAQLDFFQKLGYSTAQI
QAAQKKFGTDTDKVLGELVRVGTGQDSKQGPVTTVSVLVPGGAPQAGGPELQLPVSGEDG
DALRAVVIDGSNVAMSHGNKEVFSCLGIQLAVNFFLNRGHSDVTVFVPSWRKEQPRPDVP
ITDQHILRELEKKKVLVFTPSRRVAGKRVVCNDDCFIVKHAYESDGVVVSNDMYRDLQGV
NPDWKRFIEERLLMYSFVNNKFMLPDDPLGRHGPTLENFLRKVPKTQRRQPCPYGRKCTY
GIKCRFHHPERTKQSTEQNTEQNQALTRCSPVSEPSLGLVEDMPKKLSLKNKSVPVGQGK
QSHRSGRRSQTRKKVDSQQSDSVSVRDRTSRETGTLDSGLGSMETMWSLSNQPYGLSYGS
VQQQFCPPSSPSSSPFQPPSSDLSPFGSPPYPSCCTFPISWPAFSQPSSRLHPSQQIWSD
PFCVCPSETRSQPGERSLWDPPADPSRKEREVVRKKLLAIFSAQLVDEAMDMSPNQLDPQ
RLVAKILELQNQHQSLR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagatgttcaaccgtggagtaaaacccccgccacacatctggacccctgtgga
tgggactcgtccccctgccgtggtccccgtgagaccatgctggagctgaacccggccccc
cggcccctccgggcccagctggacttctttcagaagctgggttactccacggcccagatc
caggccgcccagaagaagttcggcacagacacggacaaagttctgggcgagctggtccgg
gtcgggaccggtcaggactccaagcagggacccgtgaccactgtgtctgtgctggtgccc
ggaggggccccccaggccgggggccccgagctgcagctgcccgtcagcggcgaggacgga
gacgctctgagagccgtggtgatcgacggcagcaacgtggccatgagccacggaaacaag
gaagtgttttcctgcctgggaatccagctggccgtgaacttcttcctgaaccgaggtcac
tcagatgtcaccgtgtttgtcccgtcgtggaggaaagagcagcctcgaccggacgtcccc
atcacagatcaacacatcctgcgggagctggagaagaagaaggttctggtcttcacgccg
tcccgccgcgtcgcaggaaaacgggtcgtctgtaacgacgactgcttcatcgtgaagcac
gcctatgagtcggacggcgtggtcgtgtccaacgacatgtaccgggacctgcagggcgtg
aacccagactggaagcgcttcatcgaggagaggctgctcatgtactccttcgtcaacaac
aagtttatgcttcctgacgatcctctgggccgacacgggccgaccctggagaacttcctg
aggaaggttccaaagactcagagaagacagccgtgtccttacgggaggaagtgtacttat
gggatcaaatgcaggttccaccacccggagagaaccaagcagtccaccgagcagaacacc
gagcagaaccaggctttgactcgctgcagtccggtctcagaacccagcctcggcttggtg
gaggacatgccgaagaagctgtccctgaaaaacaagagcgtcccggtgggtcagggcaag
cagagccaccgctccggaaggaggtctcaaaccaggaagaaggtggacagccaacagtcg
gacagtgtctcagtcagggacaggacctcccgggagactgggactctggactctggtttg
ggctccatggagactatgtggagtctctccaatcagccgtacgggctgtcctacggtagc
gtccagcagcagttctgtcctcccagcagtccatccagcagtcccttccagccccccagc
tccgatctgtcccccttcggttctcctccctaccccagctgctgcacgttccccatcagc
tggcctgccttcagtcagcccagcagcagactccaccccagccagcagatttggtccgac
ccgttctgcgtctgtccctcggagacccgcagccagccgggcgagcgctcgctgtgggac
cccccagccgatcccagcaggaaggagagggaggtcgtccggaagaagctgctcgccatc
ttcagcgcccagctggtggacgaagccatggacatgtccccgaaccagctggaccctcag
aggctggtggcaaagatcctggagctgcagaaccagcaccagtctctgagatga
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