Kryptolebias marmoratus (mangrove rivulus): 108228853
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Entry
108228853 CDS
T05608
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04621
NOD-like receptor signaling pathway
kmr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108228853 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108228853 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
kmr04054
]
108228853 (nod1)
Pattern recognition receptors [BR:
kmr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108228853 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
LRR_4
NOD2_WH
AAA_16
CRS1_YhbY
NPHP3_N
AAA_22
AAA_18
RsgA_GTPase
Roc
ABC_tran
NB-ARC
RNA_helicase
RedAm-like_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
108228853
NCBI-ProteinID:
XP_037836102
LinkDB
All DBs
Position
LG16:31955006..31985215
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AA seq
940 aa
AA seq
DB search
MGQIEEAKVSCLHTLTQHRELLVSRLKSIQCLLDNLLACGFFCEEDVEIVQRTVTKPNQV
RKILELVQCKGEETCDYFIFIIFQVCDAYIDLQPWLKEIAYRPSKNVAEMKVINTDPISR
YCEKLRDEMSRDTSFIMSYGQQDETRLEDLYTDTVMEMLNDCNESLGFKDTLNQFLGNDG
VFNPQGEIICVMGDAGVGKSILLQKLQNLWSKKELQTDAIFFFKFRCRMFSIFKEEEQIS
LRDLLFKYNCYPDHDPDNEVFDYILRFPEKVILTFDGYDEIQELIDQISVPEMVSPEDKA
NSLQLLISLLSGKLLKGSKKVLTTRTGVEMQNRVIRKKVILRGFSPDHQKKYINLHFKEQ
EHRELVSVQLDASPHLCGLCSTPLFCWIVFKSFSHLHTRHDNFHLPKTCITLTDIFLLLS
EVFLSRSASPAPSLLKKSIHCTSETFRAGLRPLSAFANLALQGLKRGSFLCNQMEISESG
LTEEDMAMGFLRPVSDCNAGDSATFEFIHTTLQSFLAAFALVLDEEATASSILKFFTECS
RKREQCCLPVAWCVTSSVKPTENKPFASNEHLQFTNLFLSGLLSKSKTSLMGHLVSPVLI
KKKQALLKSYLSTSVKSHLQGLPIHHGDEGKKVHVLPNFLWILRCIFETGSKDIAKMTAK
GITASFIKLGYCNVYSGDCTAINFVLQHRQKLLGLDMDNNNISDYGVKQLRPSFCMMTVV
RLCVNNLSDSSIEVLAEELCKHKIVKVLGLYNNNITDTGAKLVAQMIEECPKLEVVKVGK
NKITSVGGRYLANAIQKSTSIFDVGMWGNCIGDEGAEAFAEALKNHPKLTNLSLSANGIT
SRGGKFLAEALLQNSVLRIFWLVQNELADEAAPHLAKLIQADTGLSHLWLISNRFTAAGI
RHFAGALEHNSKLKEICVKGNLLSEEEQKEFLPQNRLRFL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagatagaagaagccaaagtgtcgtgcctccacaccctcacccagcatagagaa
ctgctggtctccaggctcaagagcattcagtgcctcctggataacctgctggcctgtggc
ttcttctgtgaggaggatgttgagattgttcagcgaactgtaaccaaaccaaatcaggtg
cgcaagatcttggagctagttcagtgcaaaggggaggaaacctgcgactacttcattttt
atcatttttcaagtgtgtgacgcctacatcgacctccagccttggctgaaagagattgcc
tacagaccaagcaagaatgtagcagagatgaaagtcattaacacagatcccatcagtaga
tactgtgagaagctgcgagatgagatgagccgagacaccagcttcatcatgtcttatggt
cagcaagatgagacccggttggaggatctctacaccgacactgtgatggaaatgttaaat
gactgcaatgaaagtcttggttttaaggacactttgaaccagttcctggggaatgatgga
gttttcaatccccaaggtgaaatcatctgtgtgatgggggatgctggtgttggaaaatcc
attcttttgcagaagttgcaaaacctctggtccaaaaaggagctgcagacagatgccatc
ttctttttcaagtttcgctgcaggatgttcagcatctttaaagaggaagaacagatatcc
ctcagggatcttttgttcaaatacaactgctacccggatcatgatcctgacaatgaagtc
tttgattacatcctgcgttttcctgagaaagttattttgacttttgatggttacgatgag
attcaggagcttatagaccagataagtgttcctgaaatggtgtctccagaggacaaggct
aactccctccagctgctcatcagcttgctctctgggaaactactaaagggctccaagaag
gtgctgacgacccgaacgggagttgaaatgcaaaatcgggtgatcagaaagaaggtgatt
ttacgcggattttccccagatcaccaaaaaaagtacataaatctgcacttcaaggaacaa
gaacaccgggagctggtgtcagttcagctggatgccagccctcacctgtgtggcctgtgt
tctactccgttgttctgctggattgtattcaagagctttagtcacctgcacacgaggcat
gataattttcatctacctaaaacctgcatcacccttacggacatctttctcctattgtct
gaagtgttcctcagtcgctcagcctcaccggccccctctttgctgaagaaaagcattcac
tgcacctctgagactttccgagctgggctcaggccactttctgcatttgcgaatctggcc
cttcaaggtttgaagaggggtagttttctttgcaaccaaatggagatcagcgagtctggt
ctgacagaggaggacatggccatgggttttctcagacctgtcagtgactgtaatgctgga
gactctgctacctttgaattcatccacaccaccctgcagtctttcttggccgcatttgct
cttgtattggacgaggaggccactgccagttctatcctcaagttctttacagaatgcagc
agaaagagagaacaatgttgtctgcctgtggcttggtgtgttaccagctctgtaaagccc
actgaaaataagccatttgcatccaatgagcaccttcagtttacaaatctgttcttgtct
ggactgctgtcaaaaagtaaaacaagtctgatggggcatctggtgtctcctgttttaata
aaaaagaagcaagccttgttgaagtcttatctgtccaccagtgtcaagtcccacttgcag
ggcttacccatccatcatggtgacgagggcaagaaagttcatgttttgcccaattttctt
tggatattaagatgcatctttgagacggggagcaaagacattgctaagatgacagctaaa
ggcatcacagcaagtttcatcaagctggggtactgcaacgtgtattcaggcgactgcacc
gccataaactttgtgctgcagcaccgtcagaagctactggggctcgatatggataacaac
aacatcagtgactatggcgtgaagcagctcaggccttcattttgcatgatgacggttgtg
agattgtgtgtcaacaacctgtcagacagcagtattgaggtacttgccgaggagttgtgc
aaacacaaaattgtgaaggttttggggctttacaacaacaatatcactgatactggagcc
aagctggttgctcagatgattgaagaatgtcccaagctggaagttgtcaaggttggtaaa
aacaagattacaagtgttggtgggaggtacttggccaatgcaattcagaaaagcacttct
atatttgatgtggggatgtgggggaactgcattggtgatgagggagcagaagcatttgct
gaagctttgaagaaccacccgaaactcaccaacctcagtctgtcggcaaatggcatcaca
tcaagaggagggaagttcctggcagaagcactacttcaaaacagcgtcctcagaatattc
tggttggtgcagaatgagttggctgatgaggcagctccacatttggctaagctgatccaa
gcagatactggcctaagccacctttggttaattagcaacaggttcactgcggctgggatc
cgacactttgctggtgctcttgaacataactctaagctcaaagagatatgcgtgaaagga
aacctgctgtctgaagaggaacagaaggagtttctgccacagaaccgtctgcgcttcctc
tga
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