Kryptolebias marmoratus (mangrove rivulus): 108228868
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Entry
108228868 CDS
T05608
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108228868 (ythdc1)
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108228868 (ythdc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
108228868
NCBI-ProteinID:
XP_037835339
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All DBs
Position
LG14:complement(26487407..26498566)
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AA seq
679 aa
AA seq
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MAADRREDKDGELNVLEDLLTEAPDQDDELYNPETERDISDKKGTKRKSERSNSQDLKRL
RPSSGHTPSRSSSSIKRPLGSSSKKASSPRSHHVTTYRHDYYDDRKGRRVVREGPRSRGG
EDARRRESQRGLEGLSRKLRRDERRASPSPRNDDNQSEEEAEYGSEQASGSSSPAASHVE
EEEEEDQEEEEDEEEEDEEGMEEEEEVEEEGEKDEEEEEEEEYDERRGGGEGNDYDTRSE
AGDSRSASSVSFSDEGESVRSGSASEASGSEKKREKLSSSVRAVRKRMENPTSKLRYILR
DARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNGAFRSARSVILIFSVRESGKFQGLA
RLASESYHGGSPIHWVLPAGMNAKMLGGVFKIDWLCRRELPFIKTAHLSNPWNDGKPVKI
GRDGQEIQPDVGAQLCALFPLDESVDVHQVARRIRHKRETPSEPRPRGRPPLREPGRRRP
EEFDLHGRKRPRTDGPPDFSQRAGFIQDLRSQPVDRRFSGVRRDVFLNGSYNDYMRDYHH
SVGPPAPWQTLAPYPNVEQQPPHHPPYYHHNHPPPPPHQAFHHHHHHHPPLPPHEAPPPR
FRDKQRAPQHRAFTSSPHDYDMRVDDFLRRTQAVVSSRRERDRQRERERGGPRRDRERER
ARDRDRERERDKERGRYRR
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccggcgcgaggacaaagacggagaactcaacgttctggaggatttactg
actgaagctccagatcaggacgacgagctctacaaccctgagaccgagcgggacatcagt
gacaagaaaggaacaaaaaggaagagcgagcgctcgaacagccaggatctaaagagactc
cgcccctcatcgggccacaccccctccagatcatcatcttccattaagagacctctgggg
tcatcctctaagaaggcgtccagccctcgaagccaccacgtcaccacctaccgccacgac
tactatgacgatcgaaagggacggcgggtagtccgggaggggcctcggagccgtggcggg
gaggacgcacggcgcagagagtcccaacggggcctggagggtctgagtcggaagctgcgg
cgtgatgagcggcgggcaagcccctcccctcgcaatgatgacaaccagtcagaagaagag
gcagagtatggctcagagcaggcatcaggtagttcctcccctgctgcctcccatgtagag
gaggaagaggaggaggatcaggaagaagaggaggacgaggaggaggaggacgaggagggg
atggaggaggaggaggaggtggaggaggaaggagaaaaggacgaggaggaggaggaagag
gaggaatacgatgagcgtcgtggtggcggcgagggaaacgactacgacactcggagtgag
gctggagattcacgctccgcctcctctgttagtttctctgacgaaggcgagtcagtgcgc
tcaggctccgcctccgaggcctcaggatctgagaagaagcgggagaagttgtcatcttca
gttcgagctgttcgaaaacgcatggagaatcccaccagcaaactgcgctacatcctgcga
gacgctcggttcttccttatcaagagcaacaaccacgagaacgtttccctggctaaagct
aagggcgtttggtccacgctgcccgtgaacgagaagaagctgaacggagcgttccgctcg
gctcggagcgtcattctgatcttctctgtcagggagagcgggaagttccaaggtttggcc
cgtttggcgtcggagtcttatcacggcggttctccgattcattgggttcttcctgctggc
atgaacgccaagatgctgggaggagtcttcaagatcgactggctctgcaggcgggagctt
cctttcattaagaccgcccacctgtccaacccctggaacgacggcaagccagttaaaatc
ggacgagacggccaggagatccaaccagatgttggcgctcagctctgcgccctgttccca
ttggacgagagcgtggacgttcaccaggtggctcgccgcattcgtcacaagcgcgaaacg
ccatcggagccgcggccccgtggccgaccaccactgcgtgaaccgggaaggcgtcgacct
gaagagtttgacctccatggcaggaagcggccacgtacagatggtccgccggacttcagc
cagcgagcagggttcatccaggacctacggagccagccggtggacaggagattctctgga
gtcagacgagatgtgtttctgaacggatcctacaacgactacatgagggactatcaccac
agcgttgggcctccagctccgtggcagactctggcaccataccccaacgtggagcagcag
cccccccaccaccccccatattaccaccacaaccaccccccacctcctcctcaccaggcc
ttccatcaccaccaccaccaccacccgcccctcccaccacacgaggctccgccccctcgc
ttcagagacaagcagcgagcgccgcagcatcgcgccttcacctccagcccgcacgactac
gacatgcgagtggacgacttcctgcggcggacgcaggcggtggtgagcagcaggcgggag
cgcgaccgtcagcgtgagcgcgagcgtggtggacctcggcgtgaccgcgagcgagagcga
gcgagggacagagacagggagagagagcgagacaaagagagggggcggtaccgcaggtga
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