Kryptolebias marmoratus (mangrove rivulus): 108228989
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Entry
108228989 CDS
T05608
Symbol
puf60a
Name
(RefSeq) poly(U)-binding-splicing factor PUF60a isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108228989 (puf60a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108228989 (puf60a)
Spliceosome [BR:
kmr03041
]
Complex A
U2 snRNP components
U2 related factors
108228989 (puf60a)
Complex B
108228989 (puf60a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
108228989
NCBI-ProteinID:
XP_017260120
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MAAAVSAGGPAPIMENGQSSTTSTAPITTKLGLPPLTPNQQEALQKAKKYAMEQSIKSVL
VKQTLMQQQPFPSLQMAPLTMGLGDALSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDT
IRQAFIPFGPIKSIDMSWDSITMKHKGFAFVEYEVPEAAQLALEQMNSVVLGGRNIKVGR
PSNIGQAQPIIDQLAEEARAFNRIYVASVHPDLSDEDIKSVFEAFGKIKSCMLSREPTTG
RHKGYGFIEYDKAQSSQDAVASMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGLPAAAAVA
AAAASAKITAQEAVGASVLGALAAPALLSQQLGLPQAVMAAQAPGVITVSGVAPIRPVLP
QVGLVTPVLATPPSATTLLGVEQKKKEEEAEQQQEVQQDGAMEPLSEQEHMSISGSSARH
MVMRKLLRKQESTVMVLRNMVGPDDLDDDLEGEVTEECGKFGRVKRVIIYQERQGEEEDA
DIIVKIFVEFSEAAEMDRAIQALNNRWFGGRKVVAEVYDQERFDTSDLSA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgtttctgcgggaggaccggctcccatcatggagaacggacagagcagc
accaccagcacagctcccatcaccaccaagctgggcctgccgccgctcacccccaaccag
caggaggcgctgcagaaggctaagaagtacgccatggagcagagcatcaagagcgtgttg
gtcaaacagactctgatgcagcagcagccgtttcccagccttcagatggcgcctctgacg
atgggtttaggagatgctctgtctcctctgcagtcggtcgcagctcagcggcagagagct
ctggccatcatgtgccgagtttatgtcggctccatctactacgagctaggagaggacacc
atcagacaggctttcatcccctttggaccaatcaaaagcatcgacatgtcctgggactcc
atcaccatgaagcacaagggtttcgcctttgtggagtacgaagtccccgaagcggctcag
ctggctctagaacagatgaactctgttgtcctggggggacggaacattaaggtcggcagg
cctagtaacattggccaggctcagccaatcattgaccagctggcagaggaagcacgtgcc
ttcaacaggatctatgtggcctcggtgcacccggatctttctgacgaggacatcaagagt
gtctttgaggcattcggaaagatcaagtcgtgcatgttgtcccgcgagccaaccactgga
cgtcacaaaggttatggcttcatcgagtacgacaaggctcaatcgtctcaggatgccgtg
gcatccatgaacctgtttgacctggggggtcagtacctgcgtgtcgggaaagctgtgact
ccgcccatgcccctcctcacgccgacaacccctggactccccgccgctgctgctgtagct
gctgccgccgccagcgcaaagatcactgctcaggaagcagttggagcgtcggtgctcgga
gcactggctgctccagctctcctttcccagcagcttgggcttcctcaggctgtcatggcc
gcccaggccccaggtgttatcacagtttcaggtgtggcaccaattcgacccgtcctgcct
caagtggggttggtgaccccggttctggccacgcccccatcagcaacaactttgcttgga
gtcgagcagaagaaaaaggaggaggaggcagagcagcagcaggaggtgcagcaggacgga
gccatggagccgctgagtgagcaggagcacatgagcatcagcggcagcagcgcgcgccac
atggtgatgaggaaactgctccgaaagcaggagtctactgtcatggttctgaggaacatg
gtcggacccgacgacctcgacgatgacctagagggcgaggtgacggaggagtgtggaaag
ttcggccgggttaagcgggtcatcatctaccaggagcgtcagggcgaggaggaggatgcc
gacatcattgtcaagatttttgtggagttctcagaggcggccgagatggaccgggccatt
caggcgctcaacaatcgctggttcggaggacggaaggtggtggccgaggtctacgaccag
gagcgcttcgacaccagcgacctgtcggcatag
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