Kryptolebias marmoratus (mangrove rivulus): 108229006
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Entry
108229006 CDS
T05608
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03020
RNA polymerase
kmr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108229006 (polr2d)
09124 Replication and repair
03420 Nucleotide excision repair
108229006 (polr2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108229006 (polr2d)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108229006 (polr2d)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
108229006 (polr2d)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108229006 (polr2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
BIG2_C
Tfb4
Motif
Other DBs
NCBI-GeneID:
108229006
NCBI-ProteinID:
XP_017260147
LinkDB
All DBs
Position
LG2:complement(91594..93189)
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AA seq
143 aa
AA seq
DB search
MAAGGAAPPQLGDVEEDASQLLFPKEFESAETLLNSEVHMLLEHRKQQNESAEDEQELSE
VFMKTLNYTARFSRFKNRETITAVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSLE
GRFEDEELQQILDDIQTKRSFQY
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggaggcgccgctcctccgcagctcggagacgtagaagaagacgcttcccag
ctgctgtttcccaaagagtttgagagcgcagagacgctgctgaactcggaggtccacatg
ttgctggaacacaggaagcagcagaacgagagcgccgaggacgagcaggaactgtccgag
gtcttcatgaagaccctcaactacacggcccgcttcagccgcttcaagaaccgagagacc
atcaccgctgtccgcagcctcctcctgcagaagaagctccataagttcgaactggccagt
ttggccaatctgtgtcctgaagcagccgaggaggccaaagccctgatccccagtttggag
ggtcggtttgaagacgaggagctgcagcagattctggacgacatccagaccaagaggagc
ttccagtactga
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