Kryptolebias marmoratus (mangrove rivulus): 108229131
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Entry
108229131 CDS
T05608
Symbol
srsf4
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
kmr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108229131 (srsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108229131 (srsf4)
Spliceosome [BR:
kmr03041
]
Common components
Common spliceosomal components
SR proteins
108229131 (srsf4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
108229131
NCBI-ProteinID:
XP_017260281
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All DBs
Position
LG5:855497..865793
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AA seq
378 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDL
CGERVVVEHTKGPRRDGGYSGGRSGYGRWAGRDRYGPPVRTDYRLIVENLSSRCSWQDLK
DYMRQAGEVTYADTHKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLIEDRPGARR
RRSYSRSHSRSRSRSRRSHKSRSRSESSSRSRSRSRAGSRSRSRSHSKKDKKKNKKEEEE
CSNGAQKDDEHSRSRSPKSKKSKKDGKSSKKESSRSRSRSGSRSRSRSRSEVKDHSGKSD
SKSREEPKSDNEAGEPERGSRSRSRSRSPDEPRAKSKSKSKSRSASPAKAGSRSRSASRS
ESRSKSRSQSRSRSRSRS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggtgtatatcggccggttgagctacagggccagggagaaggacgtggagcgg
ttctttaaaggttacgggaagattctggaagtggacctgaaaaatgggtacgggtttgtt
gagtttgacgacccgcgtgacgccgatgatgccgtgtatgacctgaacggcaaagatctg
tgtggcgagcgggtggttgtggagcacaccaagggaccccgacgtgacggaggctacagt
ggtggacggagtggatatgggcgctgggcaggaagagacaggtacggtccacctgtaagg
acagattatcggctcattgttgagaatctttccagccgctgcagctggcaagacttaaag
gactacatgaggcaggcgggggaggtgacgtacgctgacacccacaagggccgtaagaac
gagggcgtgatcgagttcaggcagtactcggacatgaagagggccctggagaagctcgac
ggcaccgaggtgaacggcagaaagatccggctcatcgaggaccgtcccggcgccaggcgt
cgccgctcctattctcgcagccactccaggtctcgctccaggagtcgcaggtctcacaag
agccgcagccgcagtgagagcagcagccgcagccggtcccgctccagagcgggttctcgt
tcccgcagccggtctcacagcaagaaggacaagaagaagaacaagaaggaggaagaggag
tgcagcaacggcgcccagaaggacgacgagcacagcaggagccgcagccccaagagcaaa
aagagcaagaaggacggcaagtcgagcaagaaggagtcgtcccggtccaggtccaggtcc
ggctctcgctccaggtctcgttccagatccgaggttaaggatcactccgggaagtctgac
tcgaagagccgcgaggagccgaagagcgacaacgaggcgggcgaacccgagaggggctcc
cgctcccgttctcgttcccgctcccccgatgagccccgagccaagtccaaatccaagtcc
aagtcccgatccgcctcccccgctaaagctggctctcgctccagatccgcctcccgctcc
gagtcccgctccaaatcccgatcccagtcccgctctcgttcccgctctcgctcctag
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