Kryptolebias marmoratus (mangrove rivulus): 108229166
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Entry
108229166 CDS
T05608
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108229166
Spliceosome [BR:
kmr03041
]
Common components
Common spliceosomal components
General mRNP proteins
108229166
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
RRM_occluded
RBD_DEAH11
RRM_7
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
108229166
NCBI-ProteinID:
XP_037831054
LinkDB
All DBs
Position
LG4:complement(179049..187791)
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AA seq
496 aa
AA seq
DB search
MADDLDIEAMLEAPYRKEVTKNRSPDSQDDSKRKKSSCSQERKHSRSRDRKHSRSRSRDR
KYSCSPDRKHSCSRSRSRDRRISSSREHWRSWERGGRYRDHQTDMLLDSLTPEERDARTV
FCMQLAARIRPRDLEEFFSAVGKVRLVRMISDRNSRRSKGIAYIEFVEASSVPLAIGLTG
QRLLGVPIIVQASQAEKNRAAAAAAAAAAVAAANTMQKVTSGPRRLYVGSLHFNITKEML
RGIFEPFGRVENIQLMMDSENGCSKGYGFITFADAESAKKALEQLNGFELAGRPMKVGHV
TERNEASTASCFLSDELELTGVDQGTTSSLQLAEGTGKQIPPAAQQALQMSGAIAIGALA
AVSAAMNPALSLNVNPPVLNLPSQPLATHCFQLSNMFHPSSENTPGWELNIQHDVIEECT
KHGGVVHIYVDKNSPEGNVYVKCLSILAAMTSVNALHGRFFRGRMITAAYVPLPTYHNLF
PESVTATQLLAPPPRR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacctggacatagaggcgatgctggaggctccgtacaggaaggaggttacc
aagaaccggagccctgacagccaggatgacagcaagaggaagaagagcagctgcagccaa
gaaaggaagcacagccgcagtcgggacagaaagcacagtcgcagccgcagtcgggacagg
aagtacagttgcagcccagacaggaaacacagttgcagccgcagtcgcagtcgagataga
cgcataagtagcagccgggaacactggcgcagctgggagcggggaggccgctacagagac
caccagactgatatgctcttagacagcctgactccagaggagcgagacgctcggaccgtg
ttctgcatgcagctggcggctcggatccgaccgcgggacctggaggagttcttctccgct
gtggggaaggttcgacttgtgagaatgatctctgacaggaactcgcgcaggtcaaagggc
attgcctacattgagtttgtggaggccagttcggttccactcgccatcggattgacgggt
cagagactgctgggagttcccatcattgtgcaggcgtcccaggcagagaagaaccgtgct
gcagctgcagccgccgccgccgctgccgtcgctgcagccaacactatgcagaaggtaacg
agtgggccgaggaggctgtatgtgggctcactgcactttaacatcaccaaggagatgctg
cgagggatctttgagccgtttggacgggtcgagaacatccagctgatgatggacagtgaa
aacggctgttctaaaggctatggcttcatcactttcgcagatgctgagtcggctaagaaa
gctctggagcagctgaacggctttgagctggcgggtcgacccatgaaggtgggtcatgtg
accgagcgcaatgaagcttccactgcttcctgcttcctgagcgacgagctggaactgaca
ggcgtggaccaaggaaccaccagcagcctgcagctggctgaaggtactggtaagcagata
cctcctgctgctcagcaggctctacagatgagcggcgcaatcgccatcggagccctggct
gctgtttcagctgccatgaatccagctcttagcttgaacgtgaaccctccagttctgaat
cttccatctcagcctctcgccactcactgcttccagctgtccaacatgttccaccccagc
agtgagaacactccgggttgggagctcaacatccagcatgacgtcatcgaggaatgcacc
aaacatggaggagtcgttcacatatacgtggacaaaaactcacctgaggggaacgtttat
gtcaaatgtttgtccatcctcgctgccatgacctctgtgaacgctctccacggaagattc
ttcagaggtagaatgatcacggcagcctacgtccctctgcccacctaccacaacctgttc
ccggagtctgtcaccgccacacagctgctggctccgcccccgaggcggtga
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