Kryptolebias marmoratus (mangrove rivulus): 108229208
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Entry
108229208 CDS
T05608
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108229208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108229208
03021 Transcription machinery [BR:
kmr03021
]
108229208
03036 Chromosome and associated proteins [BR:
kmr03036
]
108229208
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
ARID
108229208
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108229208
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108229208
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
108229208
NCBI-ProteinID:
XP_017260358
LinkDB
All DBs
Position
LG19:<1097306..1102247
Genome browser
AA seq
2157 aa
AA seq
DB search
MAAQVASVPTRTNNNKNKKLSGGLGPELNSGKSERGGTAQRSGPMLGAGDGTLNNVDHHR
RNELSMVHSTSTAHMGPDGHDKVGNNLTSASNPNTSPMETGLIPNHKLKCVGSVEPPQSQ
PAQQPPQFGQFAPHQQRQIESNSASNNGQPPRGERSMDHQHHGGKENLLGGQEDAPGKGE
GELTCKPAERMMSSRFEHSNLGPPNNSEFNNNYYPPRPCYDQHGGQQQQSSGMGVTHSSA
HNSMENSHEAGYHNSQYGQYPAYRAGYGGGAYGMMGPSGCRQPGNMMMGSNSSAPHGKSP
LGAASGGFQRYPGQTSQQQHPSGATPTLNQLLTSPSPMMRGYGGGYQDYAGPTPQQQASM
SLGKDVGPQYGATSAHWGGQQRNHPLSMNPGNGGQGLSRAQVSSMDFMAMKRSQMYGMAN
NPYSNPQQPGVGPYPSSQPYASPPPHRYPMGMQGRSQMGMGGMQYPQQQVAPYGQQPMGG
FGQQQQGGQQGTPSYFSTPQQTPTGPSQSSYLQPRPPPQQEAQQESYNIRGPAPGNSGKT
GEDGVPHDRPSSLPDLSGSIDDLPTGTEAGLGPAVSAAGSSNSSNSSGSQGEQGGTGNQG
QSPFSPHASPHLPSQRSGPSPSPVGSPAGSTQSQQSRSGSGPISPANSTVPGSTMTPQNS
GNGPDGAHLPITRSPMAQERGFVSGMQRNQSGSQFASPQSGPPMSPHPSPGGSMYPGMGS
YSQSGPAGLYGPQGPQYGHQGNYPRPSNYSGAVSTSYSSPGPGMTNSLEMNATSPMHGQG
PGQPVPGGRNLGPGSQNRTYPSMGPSSPSMPQSAGPGMGPPSLGNRKSQEGAAAGMPGSA
NSVHNRQGNYQGPSINQGSAISYTQPTSNNSSATGNGQGPGYSIPPSGDGIMSPDGKLKL
DVKDDGGPNSETHKPKLQDGYMNNNSSSASQPATPGGTLPMPSPLSPSPASLSSYHGDDS
DSISSPPWPLKTPSSPKVNPNSSSSIGGERISRLYELGAEPERRAWVERYLTFMEERGTP
VTQLPVVGKKPLDLWKLYMAVREIGGLAMVNKNKKWRELSSTLNVGTSSSSASTLKKQYI
QYLFAYECKMERGEEPPPDAMASAGDAKKPLSLQAKIQPPSPANSGSLQGPNTPQSSSSS
LMEAPVDLKPPTPSATPHSQMGPQPGSRNLGGVSVQDPFSEGSDPAFQNKRGPGPGGGPY
QQGGGPTDPSMRLQFDTNKDPYGDPRKGPVPGEVFGPGQMPGSAMQDMYPRGPPSGPGSA
MGPKPQYPYGPGYERRLDHGMGPDGGMAPPAGQNSMCPSGNEAGMIPSNRYPQQRHGHDG
YGQQFPHMAYSSHQPLFPQQQGYKRPMEGVYPPAKRHEGEAFASQQSDVFGPYGAGNGGF
MGPERRPVQGQYLYPYSRDRPGPPQHGVMSSGGTTVSGGPGEGPQSNMWPPRTDVGFTYS
RQGQGPPYPPMNRGDEQEVRTPQDTQWPPSHLNQRQPPFAPHSSSSSSAPPARPPPSSFQ
ATPTIQNHVTRSHSPSCFPRPPAGSLSPNSSAYLSSVKKPGLPGAPTGPPPAQGLPLIHR
EVSFPPSSVEATSPKLKPRRRLTAKETGTPEAWRVMMSLKSGLLAESTWALDTINILLYD
DGTVGSFNLAQLTGFLELIVEFYRRCLIQIFGILEEYEVGAEGQKTLLGPLPEDLKEAGA
PEPEGQAEEAETEDTKPVQEDTEPRPQQSSKFDKLPIKVEETGEGWEEVEERWSSLSRHN
GFISGLLHWKAGGGDSTAHIHTHFEPRTGDFTPPDPDPDPDRTEGSDRTGDFTPPDLKEG
STGGTEDELQGDSLSEVKGQRSTQSPISQLEDEPRCCDEAPLSTAESWQDSLAKRCICIS
NIMRNLSFVPGNDAVLSRHPGLVLILGRLVLLHHRHPPRKRTPPTYQREEEQGLACSRDE
WWWDCLAALRENTLVTLANMAGQLDLSQYPESVCLPILDGLLHWMVCPSAEAQDPFSSAG
SFSSLTPQRLVLECLCKLSIQDCNVDLLLATPPFSRQRKLFSTLLRLVGERRSQVCREMA
VAVLSNLARGDPAAARAIALQKGSVGTLIGFLEDSLAMAQYQQNPHGLLHATLPPEPPSI
NMMCRAAKALLAMASVEENREEFVLFEGRLLDISLSAALNPSVASIMCEVLFKLSRS
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcggttccgaccagaactaataataacaaaaacaagaaatta
tccggcggtttgggtccggagctcaattcggggaaatccgaaagaggagggaccgcgcag
cggagtggaccgatgctgggcgccggcgatggaactctgaataatgtagaccatcaccgc
cgaaacgagctcagcatggtccattcaacttccaccgctcacatgggtccggatggccac
gacaaggtcgggaataacctcacgtccgcgtcgaatccgaacacttcgccgatggagacg
ggtctgatcccgaaccataagctgaagtgtgtggggagcgtagagcccccccagtctcag
ccggcgcagcagccgccgcagttcggccagtttgcgccacatcagcagcgacagattgaa
agtaacagcgccagcaacaacggccagcctccccgcggggaacgaagtatggatcaccaa
caccacggtgggaaagagaacctgttggggggacaggaggacgcgccggggaaaggtgag
ggggagctcacctgtaaacccgcggagaggatgatgagctccaggtttgaacactcgaac
ctggggccgccgaacaactccgagtttaataacaattattaccctccaaggccgtgttat
gatcaacatggcgggcagcagcaacaaagcagcgggatgggggtaacccactcctcggca
cacaacagcatggagaactcccatgaagcagggtaccacaacagccagtatggccagtac
ccagcataccgtgcgggctacggcggcggggcctacgggatgatgggcccctctggatgc
aggcagccaggtaatatgatgatgggcagcaactcttcagctccccacggcaagtctccc
ctgggagctgcctcgggtggctttcagaggtacccgggacagacttcgcagcagcagcat
ccctcaggggccactccgaccctcaaccagctgctgacatctcccagccccatgatgcga
ggttacggagggggctatcaagactacgctggccccacacctcagcagcaagccagcatg
agcctggggaaagacgtggggccccagtacggagccacctcggcacactggggagggcag
cagcggaaccacccgctttcaatgaacccaggaaacggagggcaaggcctcagcagggcg
caggtttcctccatggacttcatggctatgaagcgctcacagatgtatggcatggccaac
aatccctactcaaaccctcaacaaccaggggttggaccttacccctctagccaaccgtac
gcatcaccacctccacatcggtatccaatgggcatgcaggggaggagccaaatgggcatg
ggagggatgcagtatcctcagcagcaggtggcgccgtatggtcagcagccaatggggggc
tttggccagcagcagcagggggggcaacaaggaaccccttcgtacttcagcacccctcag
cagactcccacaggcccgtcgcagagttcctacctgcagcctcgaccgccgccgcaacag
gaggcccagcaggaaagctacaatatcagaggtccagctccagggaattctgggaagact
ggtgaggatggggtcccccacgaccgcccctccagtctgccggatctgtctggctcgatt
gatgacctccccactgggactgaggctggtctgggcccagccgttagcgctgccggatcc
tccaacagcagcaacagcagcggtagccaaggggagcagggaggcactggtaaccaggga
cagtcccccttttcccctcacgcctcccctcacctccccagccagaggagcgggccctct
ccctcccccgtgggctccccggcgggctccactcagtcccagcagtcccggtcgggttca
gggcccatctctcctgctaacagcactgtgccaggttcaacgatgaccccacagaactct
ggaaatggaccagatggggcccatctgccaatcacacgttcacctatggctcaggagaga
ggtttcgtgtccggcatgcagagaaaccagtcaggctcccagtttgcatccccacagtct
ggacctcctatgtccccccacccatcccccgggggttcgatgtaccccggtatgggttcg
tactcccagagtggccctgctggtctctatggacctcaaggacctcaatatggacaccaa
ggtaactaccctcggccctctaactacagcggggcagtcagtaccagctacagcagccct
ggacccggcatgactaacagtctagagatgaacgctaccagtcccatgcatggtcagggc
cctgggcagccagtacctggaggacgcaaccttggcccaggcagccagaatcggacgtac
ccatctatgggtcccagttctcccagcatgccacagtcagcagggccaggaatgggtcct
ccctctttgggtaaccgcaagtcccaggaaggagcagcagctggcatgcctggttctgct
aactcagttcacaacaggcagggaaactaccaaggcccaagcatcaaccaagggagcgcc
atctcctacactcagccaacgagcaacaatagttcagctacaggaaacggacaaggtccg
ggctacagtattcctccttcaggagatggcataatgagcccagatggtaaactaaagttg
gacgtcaaagatgatggcggccccaacagcgaaacacacaaaccaaagcttcaggatggt
tacatgaacaataacagcagcagcgcgtcccagccagccactccaggtgggaccctaccc
atgccctcccccctctcccccagccccgccagcctgtcttcataccacggagatgacagc
gacagcatcagcagcccaccctggcctctcaagaccccctccagccccaaagtcaaccca
aactcctcctcctccatcggcggcgagcgaatcagccggctgtacgagctgggtgcagag
cccgagaggcgagcttgggtggagcggtatctgaccttcatggaggagcggggcacgcct
gtcactcagcttccagttgtgggcaagaaaccactggacctgtggaagctctacatggct
gttcgggagatcggaggcctcgccatggtgaacaaaaacaagaagtggcgcgagctgtcc
agcaccctgaacgtcggtacgtccagcagctctgccagcaccctgaagaagcagtacatc
cagtacctgttcgcctacgagtgcaagatggagcgaggggaggagcctccgcctgacgcc
atggcgtccgccggagacgccaagaaacccctgtccctccaggccaagattcagcctccc
tccccagccaactcgggctccttgcagggccccaacacccctcagtccagcagcagctcg
ctcatggaggcccccgtggacctgaagcccccgaccccgtccgccacgcctcacagccag
atgggcccccagccaggaagcaggaacctggggggtgtgagcgttcaggaccctttttct
gaaggcagcgacccagcctttcagaacaagcggggcccggggcccggaggcggcccctac
cagcagggcggaggtccgacagacccgagcatgaggctgcagtttgataccaacaaagat
ccgtacggagacccgcggaaaggtccggttcctggggaggtctttggtcccggtcagatg
cccggcagtgccatgcaggacatgtacccccgggggcctccctctggccccgggtcagcg
atgggccccaaacctcagtacccctacggccccggctatgagcggagactggaccatggg
atgggtcctgatggaggcatggcgccccctgcaggtcagaacagcatgtgtccgtctgga
aacgaggccggcatgattccctccaacagatacccccagcagaggcacggacacgacggt
tacgggcagcagtttcctcacatggcctacagttcccatcagcccctgttcccccagcag
cagggctacaagcgtccgatggagggggtgtatccgcccgccaagcgccatgagggcgag
gcgttcgcttcccagcagtccgacgtgttcggcccgtacggcgcaggaaacgggggcttc
atgggccccgagcgccggcccgtccagggacagtacctgtacccgtacagccgggacaga
ccaggacccccgcaacacggcgtgatgagttcaggggggacgacggtgtccgggggcccc
ggggaggggccgcagtccaacatgtggccccccaggacagacgtgggcttcacctacagc
cggcagggccaggggcccccctacccccctatgaaccgaggggacgaacaggaggtcagg
accccccaggacacacagtggccccccagtcaccttaaccagcgtcagccccccttcgcc
ccacactcctcctcctcctcctccgcacctcctgctagacccccgccctcctccttccag
gccacacccaccatccaaaatcacgtgacccggtcccacagcccctcctgtttcccccgg
cccccagccggctccctgtcccccaacagctccgcctacctgtcctccgtcaagaagcca
gggctgccgggggccccgaccgggcccccacctgctcagggcctccccctcatccacaga
gaggtcagcttcccccccagctctgtggaggccacgtcccctaaactgaaaccacggcga
cgccttacagctaaggagacaggaactccagaggcgtggcgagtgatgatgtcactgaag
tcgggcctgttggcggagagcacgtgggcgttggacaccattaacatcctgctgtacgac
gacggcaccgtgggctccttcaacctggctcagctcacgggtttcctcgagctcattgta
gagttctaccgccgctgcctcattcagatctttggcatcctggaggagtacgaggtgggg
gccgagggccagaagaccctgctggggcccctccccgaggacctgaaggaagcaggggcg
cctgaacctgaaggtcaggctgaagaggcggagacagaggacactaaacctgtccaggag
gacacagagccccgcccccaacagagcagcaagttcgacaaactgccaatcaaagtggag
gagacgggggaggggtgggaggaggtggaggagcgctggagcagcctgagccgacacaac
ggcttcatcagcggcctcctgcactggaaggccgggggcggagactccacggctcacatc
cacacacactttgagccccggacaggagacttcacccccccagacccagacccagaccca
gatcggaccgagggcagtgacaggaccggagacttcacccccccagacctgaaggagggc
agcacaggaggaactgaggacgagcttcaaggagactctctgtctgaggtcaaaggtcag
aggtcgactcagagtcccatcagccagctggaggacgagccgcggtgctgtgacgaggcg
cccctgtccacggccgagtcctggcaggactctctggccaaacgctgcatctgcatctcc
aacatcatgcggaacctctccttcgtccccggcaacgacgccgtcctgtcgcggcacccg
ggcctggttctgatcctgggccggctggtgctgctgcaccaccgccacccccccaggaag
cggacgccccccacctaccagcgggaggaggagcagggtctggcctgcagccgggacgag
tggtggtgggactgcctggcggcgctgcgggagaacacgctggtgacgctggccaacatg
gcgggccagctggacctgtcccagtaccccgagagcgtctgcctgcccatcctggacggg
ctgctgcactggatggtgtgtccgtccgccgaggcacaggaccccttctcctcggcgggc
agcttctcctcgctcacgccgcagagactcgtcctggagtgtctctgcaagctgagcatc
caggactgcaacgtggacctgctgctcgccacgccgcccttcagccgccagcgcaagctc
ttctccacgctgctgcgcctggtgggggagaggaggagccaggtgtgccgggagatggcg
gtggccgtgctgtccaacctggcgcggggcgaccccgcggcggcgagggccattgccctg
cagaagggcagcgtgggaactctgatcgggttcctggaggacagcttggccatggcccag
taccagcagaaccctcacggcctactgcacgccacgctgccgccggagccgcccagcatc
aacatgatgtgccgcgcggccaaggcgctgctggccatggcgagcgtggaggagaaccgg
gaggagtttgttctgttcgagggccggctgctggacatctcgctgtccgccgccctcaac
ccgtcagtggcgtccatcatgtgtgaagtactgttcaaactcagccgctcgtga
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integrated database retrieval system
