Kryptolebias marmoratus (mangrove rivulus): 108229222
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Entry
108229222 CDS
T05608
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108229222 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108229222 (lamc1)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_LMN_ATRN
DUF745
EGF_Teneurin
Alanine_zipper
ATG17_like
Motif
Other DBs
NCBI-GeneID:
108229222
NCBI-ProteinID:
XP_017260379
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
EDGLCSASLCPGACDCQDNTGGLSCERCKDGFYGDASQGTPDDCQPCPCPSGATCAVVPR
TREVVCTNCPGGTTGKRCELCDDGFFGDPLGQNGPVRACRACQCSNNIDPNAVGNCNRET
GECLKCIYNTDGFFCDHCKDGFYGNALASDPTDKCKPCSCSRLGTVNQQTSCSQVTGQCP
CLSNVIKRDCSACQVGFFNLQSGNGCDRCNCNSIGSTSGLCDIISGQCECQPGVTGQHCE
RCELNFFGFSPSGCKPCDCDPEGSHSGQCKEDGRCECRPGFVGTRCDMCEENYFYNRSVP
GCQQCPSCYSLVRDKVNQQRQKLQELQTLIDNLGSGKDLVSDKAFEDRLKEAEKAIMELL
EEAQTSKDLDRGLLQRLNSINNTLTTQWNRLQNIRNTVDDTGAQADRARDRVRDAESLIE
RARQELDKAKEAVAKVDVKPSSVPGDPNNMTLLAEEARRLADRHKMDADQIEKIAKDAND
TSTRAYNTLLRTLEGESRTSDEIDKLNKKYDDAKKLAKQLEQQADRVQAEAEKAGDQALK
IVANLTSLPPFDTAPLEEEAGKIKKEALDLDKLIDKTETEYNNLRDDLRPMERTVRKLLE
EGKSEQQTADQLLARADAAKALAEEAAKKGQSTFTEAESILDDLRDFDRRVNDNKTAAEE
AMKKIPSINATIMAANEKTRQAEESLGNAAADAREAKEKAEDAERIASNVQKGSAKTKEE
AEQALQDTNQLDSEVNDMMDQLSAAEQELRRKKEEADNDMMMAAMASDSAKEAEDNARKA
KSTVKTVLKLISTLMEQLGNIDKVDLSKLNQIDESLKRAKDKMADSGLDNKLKELNDVAS
TQEELIKNYDQQIREIKADIDNLNDIKNTLPDGCFNTASLEQP
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
gaagacggtctctgctctgcgtctctttgtccaggagcgtgtgactgccaggacaacact
ggcggtctgagctgtgagcgctgtaaggacggtttctatggcgacgcctctcaggggacg
ccggacgactgtcagccgtgtccctgcccgtcgggggccacctgcgccgtggtccccaga
accagagaggtggtctgcaccaactgtcccggcggaaccacaggtaagcgctgcgagctc
tgcgacgacgggttcttcggggatcctttgggtcagaacgggccggtccgagcctgccgc
gcctgccagtgcagcaacaacatcgaccccaacgccgtcggcaactgcaaccgcgagacc
ggagagtgtctgaagtgcatctacaacaccgacggcttcttctgcgaccactgcaaggac
ggtttctacggcaacgccctggcgtccgaccccacggacaagtgcaaaccctgctcctgc
tcccgtctcggcacggtgaatcaacagaccagctgctctcaggtcactggtcagtgtcca
tgcctgtccaacgtgatcaagcgcgactgcagcgcctgccaggtcggattcttcaacctg
cagagtggcaacggctgcgaccggtgtaactgtaactccatcggctccaccagcggcctg
tgtgacatcatctcggggcagtgcgagtgtcagcccggcgtcaccggccagcactgcgag
cgctgcgagctcaacttcttcggcttcagcccgtcaggatgcaaaccctgcgactgtgac
cctgaagggtcccactcgggtcagtgtaaggaggacgggcgctgcgagtgccgacccggc
ttcgtggggactcggtgcgacatgtgtgaggagaactacttctacaaccgctccgtgccg
ggctgccagcagtgcccctcctgctacagtctggtccgagacaaggtgaaccagcagaga
cagaagctccaagaactgcagaccctgatcgataaccttggctcggggaaggacctggtg
agcgataaggccttcgaggatcggctgaaggaggcggagaaggccatcatggagctgctg
gaggaggctcagaccagcaaagatctggaccgaggtctgctgcagcgcctgaactccatc
aacaacacgctgaccacccagtggaaccgcctgcagaacatccgcaacacggtggacgac
acgggcgcccaggccgaccgcgctcgggaccgggtccgggacgccgagagcctgatcgag
cgggcgcgccaggagctggacaaggccaaggaggccgtggccaaagtggacgtcaaaccg
tccagtgtccccggagaccccaacaacatgacgctgctggccgaggaggcgcgccgcctg
gccgacagacacaagatggacgccgaccagattgagaagatcgccaaagacgccaacgac
acgtccacccgggcgtacaacacgctgctgaggactctggagggagagagcaggacgagc
gacgagatcgacaagctcaacaagaagtacgatgacgccaagaagctcgccaagcagctg
gagcagcaggccgaccgggttcaggccgaggcggagaaggccggagaccaggctctgaag
atcgtcgccaacctgaccagcctcccgccgttcgacacggcgcccctcgaggaggaagcc
ggcaagatcaagaaggaggcgttggacctggacaagctcatcgacaagacggagacggag
tacaacaacctgcgagacgacctgcggcccatggagcggacggtccggaagctgctggag
gagggaaagagcgagcagcagaccgcagaccagctgctggcccgagccgacgccgccaaa
gctctggctgaggaggcggcgaagaaaggccagtccacgttcacggaggccgagagcatc
ctggacgacctgcgagacttcgacaggagggtcaacgacaacaagacggcggcagaggaa
gccatgaagaagatcccctccatcaacgccaccatcatggccgccaacgagaaaacgcgg
caggcagaggagtcgctcgggaacgccgccgccgacgctcgggaggctaaggagaaggcg
gaggacgccgagaggatcgccagcaacgtgcagaagggctcggccaagaccaaagaggag
gcggagcaggcgctgcaggacaccaaccagctggacagcgaggtcaacgacatgatggat
cagctgagcgccgccgagcaggagctgaggaggaagaaggaggaagctgacaacgacatg
atgatggcggcgatggcgtccgacagcgccaaggaggcggaggacaacgctcgtaaggcc
aagagcacggtgaagaccgtcctgaagctcatctccaccctgatggagcagctggggaac
atcgacaaggtggacctgagcaaactcaaccagatcgacgagtcgctgaagagggccaag
gacaagatggccgacagcgggctggacaacaagctgaaggagctgaacgacgtggcgagc
actcaggaggagctcatcaagaactacgaccagcagatccgcgagatcaaggccgacatc
gacaacctcaacgacatcaagaacacgttacccgacggctgcttcaacacggcctcgctg
gagcagccttag
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